Amborella trichopoda: 18427098 Help Entry 18427098          CDS       T02990                                  Name (RefSeq) splicing factor 3B subunit 1   KO K12828   splicing factor 3B subunit 1 Organism atr  Amborella trichopoda Pathway atr03040   Spliceosome Brite KEGG Orthology (KO) [BR:atr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     18427098  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:atr03041]     18427098    03036 Chromosome and associated proteins [BR:atr03036]     18427098 Spliceosome [BR:atr03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     18427098  Complex B     18427098  Complex C    U2 SnRNP specific factors     18427098 Chromosome and associated proteins [BR:atr03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     18427098 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME Motif Other DBs NCBI-GeneID:  18427098 NCBI-ProteinID:  XP_011620713 LinkDB All DBs Position Unknown AA seq 1269 aa AA seqDB search MAALEDDIARIQEERRKKEKELASLTTVTFDADLYGGGNKFEGYELSIPVNEDEEENQDV GERAVARKLASYTAPKSVLNEVPKGGEEDDVGFKKPQRIIDREDDYRRRRLNRIISPDRN DAFAMGDKTPDASVRTFADVMKEESIKREKEKEREEKMRLAKKQEEEEREKASDGVSQVA GAQKRRNRWDQSQEAQESVKKPKVSDWDAPDATPGISRWDATPTPGRAEAVTPATGSRRN RWDETPTPGRLADSDATPVGGVTPGATPAGMAWDATPKLSGVATPTPKRQRSRWDETPAT MGSSTPLPGATPTAFTPGITPVGGVDLATPTPGAINIRGAMTPEQYNLLRWEKDIEDRNR PLSDEELDAMFPQEGYKILEPPASYVPIRTPARKLLTTPTPMGTPLYSIPEENRGQQFDV PKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPDEQKERKIMKLLLKVKNGTPPQRKTAL RQLTDKAREFGAGPLFNRILPLLMSPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVA SALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLRSLVEIIEHGLND ENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPL MDAMYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRTEILPEFFR NFWVRRMALDRRNYRQLVDTTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVV ANLGASDINPRLEENLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGT IKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILG ALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREW MRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVA IAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLED ALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIE GMRVALGPAAVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDGLVAAYPVLEDEGSNIF SRPELMMFV NT seq 3810 nt NT seq  +upstreamnt  +downstreamnt atggcggcgttagaagatgacatagccaggattcaagaagagaggaggaagaaggagaag gagctcgcttccctaacaactgtgacatttgatgccgatctctatggtgggggcaacaaa tttgagggctatgagctctcaattcctgtcaatgaagatgaggaagaaaatcaagatgta ggcgagcgtgcagttgcccgcaaacttgcttcatacactgccccaaaatctgtcttaaat gaggtgcccaaagggggtgaagaagatgacgtgggtttcaaaaaaccccaaagaatcatt gatcgagaagatgattatagaaggagaaggcttaatcgaatcatctcgcctgatcgaaat gatgcctttgcgatgggagacaagacccctgatgcatcggtgaggaccttcgctgatgtc atgaaagaggagtccattaagagagagaaagagaaggaaagggaggagaaaatgcgcctt gcgaagaagcaagaagaagaggagagggagaaggctagcgatggtgtttctcaagttgcg ggtgctcaaaaacgaagaaatcgatgggaccaatctcaagaggctcaagaaagtgtgaaa aaacccaaagtttcagattgggatgctcctgatgctacaccggggataagtcgttgggat gctactccaactccgggtcgagctgaagctgtaactccagctactgggtcaaggagaaat agatgggatgagacaccaacaccaggaaggttggctgattccgatgctacaccagttggt ggtgtaacgcctggtgctacaccagcaggcatggcttgggatgcaactccaaagctttcg ggtgtggctactccaacacccaaaaggcaacgatctcgatgggatgagacccctgcaaca atgggttcttctactcctcttcctggtgctaccccaactgcctttacgccaggcattact ccagttggtggggttgatctcgctactccgacacccggtgctattaatataagaggggca atgacacctgaacagtataatttgttgaggtgggagaaggacatagaagacagaaatagg cctctgagtgatgaggagttggatgcgatgtttcctcaggagggttataagattttggag ccaccggcttcatatgtacctataaggacaccagcaaggaagctccttaccaccccaacc cctatgggtacacctttgtattcaattcctgaagagaatagggggcagcagtttgatgta cccaaggaggctcctggtgggctgccatttatgaaacctgaggattatcaatactttggg gctttgttgaatgaggaagatgaagaggaattgtcaccagatgagcaaaaggagaggaag atcatgaaactcttgctgaaggtgaagaatggtactcctccacaaaggaaaacagcacta aggcagctcactgacaaggctcgagaatttggggcaggtccactttttaacaggattttg ccgttgctcatgtctcctactctcgaggaccaggagaggcatcttttggttaaggtcatt gatagagtgctttacaagcttgatgaactagtcaggccttttgtgcacaagatactggtg gttattgagccactccttattgatgaggactactatgccagagttgagggaagagagatc atctcgaatcttagcaaggctgctggtttggctaccatgattgcagctatgaggcctgat attgataacatagatgagtatgttaggaatacaacagcaagggccttcagtgtcgtggct tctgcacttgggattcctgctctattgccctttttgaaggcagtctgtcagagtaagaaa tcatggcaagctaggcacactggtattaagatcgtgcagcaaattgccattctcatgggt tgtgcagttcttccccatctgaggtctttagtggagatcatagagcatgggttgaatgat gagaaccaaaaggtgcgaaccattactgctttatcacttgctgcccttgccgaagctgct gctccttatggtattgagagtttcgattcagttttgaagcctttgtggaaaggtataagg tcccacaggggcaaggtccttgctgctttcttgaaggccattggttttatcatccctctc atggatgcgatgtatgccagctactatacaaaggaagttatggtcatattgattcgagag ttccagtctcccgatgaggagatgaagaagattgttttgaaggttgttaagcagtgtgtg agcactgagggggtggaggctgattatatcaggactgagattttgcccgaattcttcaga aacttttgggtcaggaggatggccttggatcgtcgcaattatagacagttggtcgatact actgtagagatcgctaacaaggttggtgtggctgatattgttggaaggatcgttgaggac ctcaaggatgaaagtgagccatacaggcgtatggttatggagacaatcgagaaagttgtt gctaacttgggggcttccgatataaaccctcgcttggaggagaacttaattgatggaatc ttatatgctttccaagagcaaacaagcgatgatgccaatgttatgctcaatgggtttgga gcagtggtcaatgccctaggacagagggtgaagccctacctgccccaaatttgtggtacc attaaatggcgtttgaataataagagtgcaaaagtgaggcagcaagctgctgatctcatc tctaggattgcggtggttatgaagcaatgccaagaagaacaactaatgggtcacttgggt gtggtgctttatgagtatcttggagaagaataccctgaagtcttgggttctatactaggg gcattaaaggctatcgtgaatgttattggaatgacgaaaatgactccacccatcaaggat ttgcttccccgattgactcccatattgaagaatcgacatgagaaggtgcaagagaactgc attgaccttgttggtaggattgctgatcgtggggcagagtttgtgcctgcaagagagtgg atgagaatttgttttgagcttctcgagatgctcaaggcccacaagaagggaatccgaagg gctactgttaacacctttgggtatattgctaaggccatagggccacaagatgtcttggcc accctactgaacaacctaaaggttcaggagaggcaaaatcgtgtttgcaccactgtggcg attgccattgttgctgagacctgttccccgttcacggtcttgcctgctcttatgaatgag tatagagttcccgagcttaatgtacaaaatggggttctcaaatctctctctttcttgttt gagtatattggggagatgggaaaggattatatatatgcagtgactccattgctcgaggat gctttaatggatagggacctggttcatcggcagactgctgcctctgctgtgaagcacatg gctttgggtgttgcagggttgggttgtgaggatgctttggttcacctgctaaattatgtg tggccaaatatattcgagacctccccccatgtgattaatgcagtcatggaagcaattgaa gggatgagagttgctctgggtcctgctgctgttctaaactactgtcttcaagggttgttt catccagctagaaaagttagggaggtttattggaaaatttataactctttgtacattggt gctcaagatgggcttgtggctgcttatcctgtgttagaggatgaggggagtaatatattc agtaggccagagttgatgatgtttgtttag

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