Amborella trichopoda: 18427165
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Entry
18427165 CDS
T02990
Name
(RefSeq) rhomboid-like protein 20 isoform X1
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18427165
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
18427165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
Rhomboid
UBA_7
DER1
RuvA_C
Motif
Other DBs
NCBI-GeneID:
18427165
NCBI-ProteinID:
XP_011620739
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MNNGPSGFHNAPVTRTFVIACTILTIFIGMQGRSSSLGLANQDIFKKLRLWRLISSIFAF
SSTPELMFGIYLLYYFRVFERQIGSNKYSVFILLSVILTALFEAIALLLLKDPSVGILAP
GPYGLIFASFIPFYFDIPVTTRFRIFGIHFSDKSFIYLAGLQLLLSSWKRSLLPGICGVL
AGISYRLNVFGIRRIKFPEFVASFFSRLSWPSSSALTGNPTGNVPSHTGRQIERNYAPAV
GLASVVEPVEDAVATLVSMGFDQNSARQALVEARNDMNMATNILLEAQSH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgggccatctgggttccacaatgctcctgttaccagaacattcgttatcgca
tgcactatccttacgatttttattgggatgcaaggtcgttcttcatcgttgggtcttgca
aaccaggacatttttaaaaagcttcggttatggaggttaatttcgtctatatttgcattt
tcatctactccagagttgatgtttggaatatacctgctatattacttccgggtgtttgag
agacaaataggctcaaacaaatactcagtctttatcttgttatctgtcatacttacagca
ctgtttgaggccattgctctgttgctgcttaaagatccctcagtaggcatactggcacct
ggaccttacggtctgatatttgcttctttcatcccattttactttgatattccggttaca
acaaggttccgtatatttggtattcacttttcagacaagtcctttatatatctcgcaggg
cttcagctgcttctgtcatcctggaagagatctctcctaccgggcatatgtggggttctg
gctggcatatcatatcgcctcaatgtttttggtattcgcagaataaagttccctgaattt
gttgcatcctttttctcacggctatcatggccttcatcttcagcattgactggaaatcct
acaggaaatgtaccttctcacactggtcgtcaaatagagagaaattatgctccagctgtt
ggccttgcatcagtagttgagccagtggaggatgctgttgccacactggtgtctatgggc
ttcgaccaaaattcagcgaggcaagcactcgtggaggctagaaatgacatgaatatggct
actaatattttgctcgaggcccagtctcattag
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