Amborella trichopoda: 18427212
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Entry
18427212 CDS
T02990
Name
(RefSeq) p21-activated protein kinase-interacting protein 1-like
KO
K14830
protein MAK11
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18427212
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
18427212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
18427212
NCBI-ProteinID:
XP_020518631
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MNLVAGTYDQVVWGFKLKIHHENETEQALLSPTFSHHAQLSPIKALSVSGPIAASSCSDE
TVRVFDINQRAEIGTLIRDNGAASCLAFYGFSPKNSSINFPVHLITGSEQGSISIFDVEA
LVHLKSIRAHKKGVNDLTIHPTGRVVLSIGRDLQLCMMNLIKGRRSFGCKLQREASLIRY
GLDGKTFFVATEGVISGHDSEDARLLFSMENSKRVNCIAPAENGLLFTGGEDCSVRAWDP
MTGKVAFSFENAHSTRLKGLVVFGERDDQGDDAPYIMASASSDGVIKVWDLRMATERPTP
LEEASIKCRLTCFGGSYIRASRKSSKS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggttgcaggcacctatgaccaggtagtatggggcttcaaactcaaaatccac
catgaaaacgaaactgagcaagcgcttctctcccccaccttctcccatcatgcccaactc
tctcccatcaaagctctgagtgtttcaggccccattgctgcctcctcgtgttcagatgaa
acagttcgggtatttgacataaaccaacgagcagagattggaaccctaatccgtgacaat
ggagctgcctcttgcctcgctttctatggctttagtcctaaaaattcatccatcaatttc
cctgtacatcttatcactggttcagagcagggttccatctccattttcgatgtcgaagct
ctggttcacttgaaatcgattcgagctcacaagaaaggtgtaaatgacctaacaatccac
ccaactggtagggttgtactgtccatcggtagggatttgcagttgtgtatgatgaatttg
ataaaggggaggaggagtttcggttgtaagttgcagagagaggcatcattgattaggtat
gggttggatgggaagaccttctttgtggcgactgagggggtgatttctggccatgattca
gaggatgcgaggttgcttttttccatggagaactcaaagagggtcaattgcattgcacct
gctgagaatgggctcctatttaccggtggagaagattgtagtgtgagagcatgggaccca
atgactgggaaggttgcattttcctttgaaaatgcacattcgactcgtctaaaaggcctt
gttgtttttggggaaagagatgaccagggtgatgatgctccatacatcatggcatctgca
tcgtcggacggggtcataaaggtttgggacttgaggatggctacagagaggccgacccca
ttggaggaagcttccatcaaatgtcggctaacttgttttggaggatcctatattagagct
tcgagaaaatcatcaaagagttaa
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