Amborella trichopoda: 18427258
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Entry
18427258 CDS
T02990
Name
(RefSeq) small RNA 2'-O-methyltransferase
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atr03036
]
18427258
Enzymes [BR:
atr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
18427258
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
18427258
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hen1_Lam_C
dsRBD2
Hen1_LCD
dsrm
DSRM_2
Methyltransf_12
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_11
Roller3_N
FKBP_C
dsrm_Ferlin
Motif
Other DBs
NCBI-GeneID:
18427258
NCBI-ProteinID:
XP_020518606
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MPTATPKSILNLKYGSQVQYKTEEVVESCGNGCPGLVMPQQSKCGFRCCLELPEFTVTSD
VFTRKKDAEQAAAKLALEKLGIQSSTSSSNQLTMKEKWEELAVRVSLLFTDGFLLSPNPL
VNHFGQAIQREGCRNGFIPASVLPTCDSKMINLCKSINPRAVSDPFLTVALIMKAAKLSD
SICASDRELWIWRQNPYSSEVKERLANKHLEHIESCQLEAVHIPCSLDQPVEPFLLQIHQ
NEYYMDVIAQKLNVEDATRVLISRPVGKASSEIRVYFTAPDIPIFLGDPSLEVTPTIKDG
LEMTLNARASYFSSQVVYGDAVVVSTGYTWRSTGLFHENFLLCSYYRMLLSKLPDGSYKL
SRDSIILSELPASYTTRSNWRGTSPRDLLTTFCHQHRLSDPIINTTNLDGCVGDANSEEP
CEESLGKVLYKCAIKILSKEEDILIECFPDVSYRRQHDAIQNAALKVLTWLNWCLKNLDL
PIEKMVSLLDARDIRVSLQSITKEFALCGLIYGGNCTLKKLKSLRPFSIEGRLGTKLVDE
IVLLGIEGADSGASPTVGSLVCISYSVILVGEHLEEPFEIERKDEFELEIGVGAIEHQLE
TSLTQMSVNQTAQLRGNLPSMDLILAAAGDAAETLPRMLSGTCSAEYTLRLLQVSEPYED
RIEQAFFTPSLSKQRMEFALHHIKELDATTLVDFGCGSGGLFDGLFDHTTVLEKVVGVDL
SRRGLTRAAKQVIEHMEEDQAQVFGDLCLGSFCPQTLIVSTPNHEYNPILQRAATPDLKS
PECPKGLSERDNVTLPCMSSECPKELEEGETFTLSCKFRNFDHKFEWTRKQFSEWATKLA
LRHGYSVEFSGVGGSADIEPGFASQIAVFKREKSDISQNGARSNRSEPYNVLWEWKAD
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagcaactcccaagtctattttgaacctaaaatatgggagtcaagtgcaatac
aagactgaagaagttgttgaaagttgtggcaatgggtgccccgggcttgttatgcctcag
caaagcaaatgtggatttcgctgctgtttggagctcccagagttcacagttacttcagat
gtgttcactagaaagaaggatgcagagcaggctgctgcaaagctggctcttgaaaagctg
ggtatccagtcctcgacctcctcgtcaaatcagctcactatgaaggaaaagtgggaagaa
ttagctgttcgtgtatctttattatttactgatgggttcctcttatcacctaatccactg
gtcaatcactttggacaagctattcaaagagagggttgccgtaacggattcattcctgct
tctgtcctccctacttgcgattcaaagatgattaatttatgcaaatccataaatcccagg
gcagtgtcagaccctttcttgacagtagcacttatcatgaaggctgccaagctctcggac
tccatatgtgcttctgatagggaactttggatatggagacaaaacccatattcttcagag
gttaaagagaggttggcaaataagcatttggagcacattgagagctgtcagcttgaagct
gttcatatcccctgctcattggaccagccagttgagcccttcttgcttcaaattcatcaa
aatgaatactatatggatgtaattgcacaaaagttgaatgttgaggatgccacccgtgtt
ttgatatctagacctgttggcaaggcatcttctgagataagagtgtatttcacagctcct
gatattccaattttcttgggagatccatcgcttgaggtgacaccaacaattaaagacggg
ctagagatgacactcaatgcaagggcctcttatttttcaagccaagtggtatatggagat
gcagtggtggtatccactgggtacacgtggaggtccacaggacttttccatgagaacttc
ttactttgttcctattacaggatgcttctcagtaagctacctgatggaagttacaagtta
tcaagagattcgataattctatctgagttaccggcctcatatacaacacgctcaaactgg
agaggaacttccccgagggatctcctcaccacattttgccaccagcatagactttcagat
cctataatcaacactacaaacttagatgggtgtgtgggtgatgcaaatagtgaggagccc
tgtgaagaatcacttggaaaagtgctttacaagtgtgcaataaaaatattgtcaaaagag
gaggatatactaatcgaatgctttcctgatgtgtcttatcggagacagcatgatgctatt
caaaatgctgccttaaaggtgctcacatggttgaattggtgtttaaagaacttagatctt
cctatagagaagatggtctctttactagatgctcgtgatattagggtttcacttcaaagt
atcacgaaggaatttgcattatgtggtttgatttatggtggcaattgtactcttaagaaa
ctcaaatctctaagacctttttccattgagggtaggttaggtacaaaattggttgatgaa
attgttcttctcggcatcgaaggtgctgattctggtgcttctccaacagtaggatcttta
gtttgcataagttatagtgtgattttggtgggtgagcatttggaggaaccatttgaaatt
gaaagaaaggatgagtttgagttagagataggcgttggtgctattgagcatcagctggaa
acctctttaactcagatgtcagtcaatcaaactgcccaacttcgtgggaacttgccttct
atggatttaattttggctgccgctggtgatgctgcagaaactcttcctcggatgttatct
ggaacatgttccgcagagtacacattaaggctgttgcaagttagtgaaccatatgaagat
agaatagagcaggctttcttcaccccctccctttcaaaacagcgaatggagtttgcgttg
catcacattaaggagctggatgctactactttggttgattttggatgtggttcgggtggc
ttgtttgatggtttatttgaccacacaactgtcttggaaaaagttgttggtgtggacctc
tcacggaggggccttactcgtgcagctaagcaggtaattgagcacatggaggaggatcaa
gcacaagtctttggagatctatgcttgggttctttttgtccacagacgctcatcgtctct
actcccaaccatgaatacaacccaattctccaaagagcggcaacccccgacttaaagtcc
cctgagtgcccaaaaggcctttcagagagagacaacgtgacccttccctgcatgtcctct
gagtgccccaaagaacttgaagagggagaaaccttcactctatcctgtaaattccggaat
ttcgaccataaatttgagtggaccagaaagcagtttagtgaatgggcgacaaagcttgcg
ttgagacatggatactctgtggagtttagtggagttggagggtcagctgacattgagcct
ggttttgcctctcagattgcggttttcaagagagagaaatctgatatttcacaaaacggg
gctagaagcaatcgatctgaaccgtacaatgtattatgggaatggaaggcagactga
DBGET
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