Amborella trichopoda: 18427273
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Entry
18427273 CDS
T02990
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18427273
Spliceosome [BR:
atr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
18427273
Other components
Complex C specific factors
18427273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
FliX
CENP-K
Motif
Other DBs
NCBI-GeneID:
18427273
NCBI-ProteinID:
XP_006836389
UniProt:
W1NUI4
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MDEYQHMEGFSMDNDYDDGQWIGGEFYYKSRKVKRHQTRDDVLFGVFAGSSSEDEGSSKK
RRRDGVSKRADLTKPVNFVSTGTVMPSKEIDQNIEENSEERMGLGMEQKDGGLGSGLGFV
SDSHGEERGSGLGLGFSRQNKDNGDGDGGDDNFLPTAFGRKIKEGVQRREKERERERERE
MSKGKMKSSKVKGEFGDVGEFEKHTKGIGMRLLEKMGYKGGGLGKNAQGIVAPIEAKLRP
KNMGMGYNSYEEKSMGLAPLPGLDEKMDVTTTVKPNIRSRDKLWLKLNRSRINKKDYVTA
DELLAKKQEQGFEMVQKVLDMRGPQVRVLTNLENLNAEETAKENQIPMPELQYNVRLIVD
LAEADIQRLDKDLRRERETVVALQREKEKLQEVEAREQKQMDNMEGILGALDKVQEANLA
GTLTLDYLSKIFSELQSQYEEDYKLGNLSCIACAFALPLMIRLFQGWQPLLNPLQGVEVM
SSWKELLQGNDAIDYGGVYTDSELGVSSPYAQLIREVVLPAIRIAATNSWEPRDPEPMLR
FLESWDKLLPPQVLQEILINMVMPKLSAAVDSWDPRRETVPIHAWLHPWLPLLGDKLEPL
YHPIQFKLGNVLHAWHASDASAYAILSPWRTVFDPISWERLIVRYIVPKLMSVLQEFQVN
PANQNLDQFYWVMSWANAIPIHHMVNLLEVGFFTKWQQVLYHWLCSNPNFEEVTQWYLGW
KDLFPKELLANERIRLQLNVGLNMMNQAVEGMVVVQPGVRENISYLRVTEQRQFEAQQQA
AAFAQNQGASGVHMDNMGVPEMSLKEAIEAYAQDNNLQFLPKVGRTHDGLQVYGFGNVSV
CVDSVKQLIFAQSGDRWVAVSLEQLMEMQRTRRAGAR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatcagcacatggaggggttctccatggacaacgactacgatgacggccag
tggattggtggcgaattctactacaagagccggaaagtgaagcgccatcaaacaagggat
gatgttttgtttggtgtatttgctggttcttcatcagaggatgaaggatcctcgaaaaaa
cgcagaagagatggagtttcaaagcgggcagatctcacaaaaccagtcaattttgtttcg
actggtactgtgatgccctctaaggaaatcgaccaaaacatcgaggaaaacagtgaggag
aggatgggtctagggatggaacaaaaggatggggggttaggttcagggctagggtttgtg
tcagattctcatggagaagagagaggttcaggattagggttgggttttagtcgtcagaac
aaggacaatggtgatggagatggtggtgatgacaattttctgcctactgcatttgggcga
aaaattaaagaaggggtgcagaggagagagaaagaaagagagagagaaagggagagagag
atgtcaaaggggaagatgaaatcaagcaaagtaaaaggggaatttggagatgtaggggag
ttcgagaagcatacaaaggggatcggtatgagattgctcgagaaaatgggttacaaagga
ggaggacttggaaaaaatgcacagggtattgttgcccccattgaagccaagcttagaccc
aaaaatatgggaatgggttacaattcttacgaggagaagtcaatggggttggccccatta
ccaggattagatgaaaaaatggatgttacaacgactgtaaagcccaatattcgttccaga
gataagctttggttgaagctaaaccgatcaaggatcaataagaaagactatgtgacagct
gacgaattgttagcgaagaagcaagaacaggggttcgagatggttcagaaggttttggat
atgagaggtcctcaagttagggttttgacgaatctcgagaatttgaatgctgaagagact
gctaaagagaaccagataccaatgcctgaacttcaatacaatgtaagattgattgtcgac
ttagcagaagcagatattcagaggctggataaagatttgaggagagagagggagacagta
gtggctctccagagagagaaagagaagcttcaggaggtggaagctcgggaacagaagcaa
atggacaatatggagggtatcttgggtgctttggataaggttcaggaagcaaatttggct
gggactttgacattggattatctctctaaaattttcagtgagttgcagagccaatacgaa
gaagactacaagttgggtaatctgtcttgcattgcctgtgcatttgcattacctctgatg
attcggctttttcagggttggcaaccattgttgaacccactgcaaggggtggaggttatg
tcatcctggaaggagctgttacaagggaatgatgcaattgattatggtggtgtatacact
gattcggagcttggtgtttcatcaccctatgcacagttgataagggaagttgttctccca
gctattagaattgcagcaacaaattcatgggagcctagagaccctgaacccatgttaaga
ttcttggagtcttgggataagcttttgccaccacaagttctccaggaaattcttattaat
atggtaatgcccaaattatcggcagctgttgattcatgggatccacgtcgagaaactgtt
cccatacatgcatggttgcatccatggcttccacttttaggagacaaactggagcctttg
taccatccaattcagtttaagcttggaaatgttctgcatgcatggcatgctagtgatgca
tcagcatatgcgattctatctccctggagaacagtctttgaccccattagttgggaacgc
ttgattgtgcgttatatagttcccaaactaatgagcgttttacaagagtttcaggtcaat
ccagcaaaccaaaatttggatcagttttattgggtcatgtcatgggcaaatgccataccc
attcatcacatggtaaaccttttagaagtaggtttcttcacaaaatggcaacaagttttg
tatcactggttgtgctcaaaccccaactttgaggaagtgacccaatggtatttggggtgg
aaggacctttttccaaaagaattacttgcaaatgagagaataaggcttcagttgaatgtg
ggtcttaatatgatgaatcaagcagtggaaggaatggtggttgttcaaccaggggttagg
gagaacatcagttatcttagggttacagagcaaaggcaattcgaggctcagcagcaagct
gctgcttttgcgcaaaatcagggagcctcgggtgttcatatggacaacatgggtgtgcct
gaaatgagcttaaaggaggctattgaagcctatgctcaagacaataacctccaatttttg
cctaaggttggtcgtactcatgatgggcttcaggtatatggctttggaaatgttagtgtt
tgtgtggattctgtgaaacaactgatcttcgcccaaagtggggacagatgggttgctgtc
tctcttgagcaattgatggagatgcaacgcactcggcgtgccggagctcgctaa
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