Amborella trichopoda: 18427310
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Entry
18427310 CDS
T02990
Name
(RefSeq) probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
atr
Amborella trichopoda
Pathway
atr00030
Pentose phosphate pathway
atr00710
Carbon fixation by Calvin cycle
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
atr01200
Carbon metabolism
atr01230
Biosynthesis of amino acids
Module
atr_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
atr_M00007
Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P
atr_M00165
Reductive pentose phosphate cycle (Calvin cycle)
atr_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
18427310
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
18427310
Enzymes [BR:
atr01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
18427310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
Motif
Other DBs
NCBI-GeneID:
18427310
NCBI-ProteinID:
XP_020518583
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MATAIRYQSPTIQPLSLQRIRRARHHFHIKRTGPTRKSMVITARNAADDLLSQAAKFTVD
NYIKSGMVVGLGSGPASFMVIKYLSRQLKEGLLKDIVGIPMSVSAASEAAKAGIPLDNHL
DTPKTDVAFNDADIVEEDTLAAIIGRPKFQGSESVIQAKSILKATSSLVFIITQMQYTRD
IDGSIPVVIRSERWMETAEEIDDLFLGDAEVWRRSAIGNAGPTGGDFPIITTEGYNILDL
IFTSPISNLSQVAQSLEAVDGVVEHGVICGIPCTAVIASEDGVHTVDNLSESALRGS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcaattcgataccagtcccccaccattcaacctctttctcttcaacgaatc
agaagagcgagacatcatttccatattaaaaggacgggaccaacgaggaaaagcatggtt
attactgcgaggaacgctgctgatgatctcctatcacaagcagctaagttcacagtggat
aactatatcaaaagtggcatggtggttggattaggatctggtccggcttccttcatggtt
ataaagtatctgagtcgacaacttaaagaaggcctactgaaagacattgtaggaatccca
atgtctgtatctgctgcaagtgaggctgcaaaagccgggattccattggataatcaccta
gatacacccaaaaccgatgttgcatttaacgatgcagatatagtagaggaggatacactg
gctgctataattggtcgtcccaaatttcaagggtctgagtctgtaattcaagcgaagtct
attttgaaggctacaagtagtcttgtattcatcattacacaaatgcagtacacaagagac
attgatggttcaattccagttgtaatccgttctgagagatggatggaaactgcagaagaa
attgacgacctattcttaggagatgcagaggtttggaggagatctgctatcgggaatgca
ggtccaacaggaggtgattttccaataatcacaacagaaggatacaacattcttgatcta
atattcacgtctcctatttctaacctatctcaagtggcacaaagccttgaggcagttgat
ggtgttgtggaacatggagtgatttgtggcattccgtgcacagcagttattgcttcagag
gatggggtgcacacagtggataacctatccgagagtgcactgagaggatcatga
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