Amborella trichopoda: 18427312
Help
Entry
18427312 CDS
T02990
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
atr
Amborella trichopoda
Pathway
atr03082
ATP-dependent chromatin remodeling
atr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18427312
03083 Polycomb repressive complex
18427312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atr03036
]
18427312
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
18427312
Histone modification proteins
HAT complexes
HATB complex
18427312
HDAC complexes
Sin3A-HDAC complex
18427312
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
18427312
PRC2.2
18427312
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
18427312
Heterochromatin formation proteins
Other heterochromatin formation proteins
18427312
Chromatin remodeling factors
NuRD complex
18427312
NuRF complex
18427312
NuRF complex (fruit fly)
18427312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_RFWD3
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
eIF2A
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_SPT8
RMC1_N
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
18427312
NCBI-ProteinID:
XP_006836428
UniProt:
W1NQR5
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MASLSLSPHLKEASKLIPLHFIPPSLFTTVAMARDEDEFRGEIEERLINEEYKIWKKNTP
FLYDLVITHALEWPSLTVQWLPDRTEPPGKDHSVQKMILGTHTSDNEPNYLMLAQVQLPL
EDAESDARQYDDERGEIGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAE
VYVFDYSKHPSKPPQEGGCHPDLRLRGHNTEGYGLSWSIFKQGHLLSGSDDAQICLWDIN
ATPKNKVLEAQQIFKVHEGVVEDVAWHLRHEYLFGSVGDDRQLLIWDLRTPSANKPIHSV
IAHQGEVNCLAFNPFNEWVLATGSADRTVKLFDLRKISTALHTFSCHKEEVFQIGWNPKN
ETILASCCADRRMMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV
IASVAEDNILQIWQMAENIYHDDDELPADESAKAS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtctttccctctctccccatttaaaagaagcttcaaaactcattccccttcat
ttcattccgccctctctctttaccaccgtcgccatggccagagacgaggacgaattcaga
ggagagatagaggagcgtctcataaacgaggagtacaagatctggaagaagaacacccct
ttcctctacgacctggtcataacccatgccctagaatggccatctctcactgttcagtgg
ctccctgataggactgagcctcctggaaaggaccactctgttcagaaaatgatccttgga
acccacacctctgataacgagcccaattatttgatgctcgctcaagttcagcttcccctc
gaagatgcagagagtgacgctcgtcaatatgatgatgagaggggtgaaattggtgggttt
gggtgcgctaatggcaaggtgcaaataattcagcagatcaatcatgatggggaggtcaat
cgagctcgttacatgcctcaaaacccttttattattgcaacaaagactgtttctgctgaa
gtttatgttttcgattatagcaagcacccctctaaacctcctcaggaaggtggatgtcat
cctgatctacggttgagaggccacaatacagaaggctatggcttatcttggagcattttt
aagcaagggcatcttttgagcggatctgatgatgctcagatttgcttatgggacatcaat
gctaccccgaaaaataaagtgcttgaagcacaacagatttttaaggtccatgagggtgtt
gttgaagatgttgcgtggcatttaaggcatgaatacttgtttggttcagttggggatgat
cgccaactgcttatatgggatctacgcacaccatctgctaacaaacctattcactctgtc
attgctcaccaaggtgaggttaattgcctggcatttaatcctttcaatgagtgggtttta
gctactggatctgcggatagaactgtcaagctttttgaccttcgcaagatcagtactgct
cttcatacgttttcttgccacaaggaggaggttttccaaattggttggaatcccaagaat
gaaacaatattggcatcttgctgtgctgataggcgaatgatggtgtgggacctcagcaga
attgatgaagaacagacgcctgaggatgcggaagatgggccccctgaactgctgttcatc
catggtggtcatacgagtaaaatctctgatttctcgtggaacccttgtgaagattgggtg
atagcgagtgtggctgaagacaacatcctccaaatttggcaaatggctgagaacatatat
cacgacgacgatgaattacctgcggatgaatcagccaaagcttcataa
DBGET
integrated database retrieval system
