Amborella trichopoda: 18427318
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Entry
18427318 CDS
T02990
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
atr
Amborella trichopoda
Pathway
atr03420
Nucleotide excision repair
atr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18427318
09124 Replication and repair
03420 Nucleotide excision repair
18427318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18427318
03400 DNA repair and recombination proteins [BR:
atr03400
]
18427318
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18427318
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
18427318
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
18427318
TCR (transcription coupled repair) factors
Cul4-CSA complex
18427318
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18427318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
18427318
NCBI-ProteinID:
XP_006836434
UniProt:
W1NUM2
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MSQAKRHSSCSPSATTSSGNGGTGPAMKKAKSLSSSASQPPFSSSSSDKQNPRFLDEDAM
LVDRKDEVIPVPAAQAVALSAGCSGTGMAANLSRKKATPPQPTKKLVIRPFKDKPKLPTN
FEEDTWAKLKSAISAILLKQPVSCSLEELYQAVNDLCLHKMGGNLYKRIQKECEEHISKT
IQSLVGQSPDLVVFLSLVEKCWQDLCDQLLMIRGIALYLDRTYVIQTSNVRSLWDMGLQL
FRKHLSLCPEVEHKTVTGLLRLIERERLGEAIDRALLNHLLRMFTSLGIYTESFEKPFLE
CTSEFYASEGVKYMQQSDVPDYLKHVELRLHEEHERCFVYLDAATRKPLVLTAERQLLVN
HTAAILDKGFTLLMDANRIPDLHRMYVLFAKVHALELLRHALSSYIRSTGQSIVMDEEKD
KDMVSCLLEFKARLDTIWEQSFNYNDVFSNTIKDAFEHLINLRQNRPAELIAKFLDEKLR
AGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISK
LKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYP
PMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTV
VLMLFNDTSKLSFQDIKDATCIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDEDSFLFN
EEFSAPLYRLKVNAIQMKETVEENTTTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLIT
ELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggcaaagcggcacagcagctgctccccctcggccaccacaagcagcggcaac
ggcggcacgggccccgccatgaagaaggccaaatccttatcttcctctgcatctcaaccc
cctttctcttcttcttcctccgataagcaaaaccctcgctttttagacgaggatgccatg
cttgtcgatcgcaaagatgaggtcattcccgtgcctgcagcgcaggctgtggcgctcagt
gcagggtgcagtggcacaggaatggctgccaatttgtcgagaaagaaggcgaccccacca
cagcccacgaagaagcttgtcatccgcccattcaaagataaacccaaattaccaactaat
tttgaggaggatacatgggcaaaactgaagtctgctatcagcgctatacttttgaagcaa
ccggtgtcttgcagccttgaagagctatatcaggctgttaatgatctttgtcttcacaag
atgggaggaaacctgtataagcgaatccaaaaggaatgtgaggagcacatatcaaaaact
attcaatctttggttggtcagagtccagatttggttgtctttctgtcacttgttgagaaa
tgttggcaggatctttgtgaccagttgttgatgattcgtggtatagccttatatctcgac
agaacatatgtcatacaaacctccaatgtacgctcattatgggacatggggttgcaacta
tttcggaagcatctttccttatgtccagaagtagagcacaaaacagttactggtcttcta
agattgatagaaagggaaagattaggtgaagctattgacagggcactccttaatcatctt
ttgaggatgtttacctctctggggatatacactgagagctttgagaagcccttccttgag
tgtacatctgagttctacgcttctgaaggtgtgaaatacatgcagcaatcagacgttcca
gattacttaaagcatgtggagttaaggttgcatgaagaacacgaaagatgctttgtgtac
ttggatgcggcgactagaaagccactggtgttgactgctgagcggcagcttcttgtgaac
catactgcagcgatccttgataagggatttactttgcttatggatgcgaatcggattcca
gatcttcacagaatgtacgtgctgtttgcaaaggttcatgcccttgaattactacgtcat
gctcttagttcgtatatcaggagtactgggcaaagtattgttatggatgaagagaaagac
aaagatatggtctcctgtcttttggaatttaaggctcgtcttgatacaatatgggaacaa
agctttaactataacgacgtgttctctaacaccataaaagatgcatttgagcatctcatt
aatctccgccagaaccggcctgctgagctaattgcaaagttcctggatgagaaacttcgt
gctggaaataagggaacatcagaagaggagttagagggtaccctagacaaggttctggtt
cttttcagatttatccaagggaaagatgtatttgaagcattctacaagaaagatcttgcg
aagaggttactactggggaagagtgcatctatcgatgctgagaagtctatgatctccaag
ctcaaaactgaatgtgggagccaatttacaaataaactggaaggaatgtttaaggatatt
gaattgtcaaaggagataaatgaatcctttaagcagtcttcacaggccaggacaaaactt
ccttctgggattgaaatgagcgtgcatgtcttaacgactggatactggcctacatatcca
ccaatggatgttagacttcctcacgaactaaatgtttatcaggacattttcaaggagttt
tacctgagcaaatatagtggaagacgcttaatgtggcaaaattccttgggtcattgtgtt
ctaaaagcagagtttccgaaaggaaaaaaggagctggctgtgtccctttttcagacggtt
gtgttgatgctgttcaatgatacttccaagctcagctttcaagatatcaaggatgccact
tgcattgaggataaagagttgcggagaacattgcagtctcttgcctgtggcaaagttcgc
gttctccaaaagctcccaaaaggaagagatgtggaggatgaggactctttcttgttcaat
gaggaatttagtgcacctctttaccgcttgaaggttaatgcaattcaaatgaaagagact
gttgaagagaacacaactaccactgaaagagtatttcaagatcgccaatatcaggttgat
gctgctatagttcgcatcatgaagacccggaaagtgttgagccacacccttttgataacc
gagctctttcagcagctcaagtttccaatcaagccagctgacctgaagaagaggatcgag
agcctaatcgaccgggagtatcttgagcgcgacaagagcaatccccagatatacaactac
cttgcttga
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