Amborella trichopoda: 18427577
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Entry
18427577 CDS
T02990
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2
KO
K12184
ESCRT-I complex subunit VPS28
Organism
atr
Amborella trichopoda
Pathway
atr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18427577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18427577
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18427577
Membrane trafficking [BR:
atr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
18427577
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18427577
Exosomal proteins of other body fluids (saliva and urine)
18427577
Exosomal proteins of colorectal cancer cells
18427577
Exosomal proteins of bladder cancer cells
18427577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS28
MiaE_2
Motif
Other DBs
NCBI-GeneID:
18427577
NCBI-ProteinID:
XP_006836689
UniProt:
W1NV98
LinkDB
All DBs
Position
Unknown
AA seq
219 aa
AA seq
DB search
MEVKLWHDKREREMYDNFADLFAIVKTTEKLEKAYVRDVVGAAEYEAECAKLIAQFRTLA
TALRDTVPSVERFLDTYRADCPAAANRLLVAGVPATVEHRSSFASDPSSAVAVAECVQHF
ITAMDSLKLNMVAVDQVHPLLSDLLSSLNKVPQIGPDFEGKTKTKEWISRLAKMGAADEL
TEGEARQLLFDLDSSYNSFIAALPKAPPSSSASSSGGGS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaagctttggcacgacaagcgggagcgtgagatgtacgacaactttgcggac
cttttcgccatcgtgaagacgacggagaagttggagaaggcttacgtccgcgatgtggtg
ggcgccgccgagtacgaggcggagtgcgccaagctgatcgcccaattccggaccctggcc
actgccctcagggacactgtccccagcgttgagcgcttcctggacacctacagggctgac
tgccctgcggccgctaaccggctgctggtggcgggggtccccgctaccgtggagcacagg
tcctcgtttgcatccgacccgtcgtctgcggtggctgtggcggagtgcgtgcagcacttc
atcacggccatggactcgttgaagctcaacatggtggctgtggaccaggtgcacccattg
ctctcggacctcctctcatcactcaacaaggtgccccagattgggcctgactttgaaggt
aagacgaagacgaaggagtggatttcaaggcttgcaaagatgggagcagctgatgagctg
acagagggggaggcaaggcagctgctgtttgatcttgactcatcctataattcattcatt
gctgccctgcccaaggcacccccttcttcgtcggcttcatcctcgggtggtggttcttga
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