Amborella trichopoda: 18427671
Help
Entry
18427671 CDS
T02990
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18427671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18427671
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18427671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
18427671
NCBI-ProteinID:
XP_006836782
UniProt:
W1NWH4
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MESDMGKLFIGGISWETNEDRLKEYFKTYGEIVEAVIMKDRTTGRARGFGFVVFSDPAVA
DRVVLEKHTIDGRTVEAKKAVPRDDQQILNRNSNSIHGSPSPARTKKIFVGGLASTVTEN
DFRKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLETYHKLNGKTVEVKR
AVPKELSPGPSRIPLGYGMNRVNSFLNGYPQGYNQGSLGGYGMRMDGRFGPLVGSRGGFP
TFSPQTYPNYGPAVSPSYGGSNFGSNLGFGRGLGPYYGGNNASRYGSPIGYNGSSGGSGS
FLSPTGRNVWGNSGLNYSASATSTGYIGSGSGSIGGFGNTGATWGSSPSMASQVGGSGGG
YGGGGSFSYGSSENGYGLGMSSFGGRTSGTGLAPSSYSGSNGGYEGSYGDLYGGSSVYGD
PTWRSGSTELDGSSSFSYGLGTMASDVATKGSGSYMGGYSVSNRQSNRGVAA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggatatgggcaaactcttcatcgggggaatctcatgggagaccaacgaggat
cgcctcaaagagtatttcaaaacatatggagaaatcgttgaggctgtgatcatgaaggat
cgaaccacaggccgagctcgtggctttggttttgtggttttttcagaccctgcagttgca
gatagagttgttcttgaaaaacacacaatagatggtcgaacagtagaggcaaagaaggca
gttccaagagatgaccaacaaatccttaacagaaacagtaacagtattcatggatccccg
agccctgcaaggaccaaaaaaatctttgtaggtggtctagcttccacagtcactgaaaat
gatttcagaaaatattttgatcagtttggaacaataacagacgtagttgtaatgtacgac
cacaacacccaaaggcctagaggattcggtttcataacttatgattctgaggatgcagtg
gacaaggttctcttagaaacctaccacaagctcaatggaaagacagtcgaggttaaaagg
gcagtcccaaaggagttgtctccaggcccaagtagaattcctcttggatatggaatgaat
agggtcaatagcttcttgaatgggtatcctcaaggttataaccagggctcccttggtggc
tatgggatgagaatggatggtcgatttggacctttagtaggatcgcgaggtgggttccct
acattttccccccaaacttatcctaattatgggccagcagtgagcccaagctatggagga
agcaattttggtagtaatcttggttttggtcgaggattaggcccatactatggtggcaac
aatgccagtagatatggcagtccaattgggtacaatggtagtagtggaggaagtggatct
ttcctaagcccaactggtcgtaatgtttggggtaattccggcctgaattattctgcttct
gcaacttcaactggatacattggatcaggtagtggaagcattggagggtttggaaacact
ggagcaacttggggttcttctccttcgatggcttcacaagtgggaggaagtggtggtggt
tatggtgggggtggcagttttagttatggaagctctgaaaatggctatggattgggaatg
agcagttttgggggtcgaactagtggtactggtttggccccaagctcatatagtggaagt
aatggtggatatgaaggtagctatggggatttgtatggtgggagctctgtttatggggat
ccaacatggaggtctggttctactgagctcgatggctccagctctttcagctatggccta
ggaactatggcctctgatgttgcaacaaagggttcagggagttatatgggaggctatagt
gttagcaacaggcaatcaaacagaggagttgcagcatag
DBGET
integrated database retrieval system
