Amborella trichopoda: 18427740
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Entry
18427740 CDS
T02990
Name
(RefSeq) chloride channel protein CLC-c isoform X1
KO
K05016
chloride channel 7
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18427740
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18427740
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atr04040
]
18427740
Protein phosphatases and associated proteins [BR:
atr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18427740
Membrane trafficking [BR:
atr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
18427740
Ion channels [BR:
atr04040
]
Chloride channels
Chloride channel (CLC)
18427740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
DUF7321
TAT_signal
Motif
Other DBs
NCBI-GeneID:
18427740
NCBI-ProteinID:
XP_006836849
UniProt:
W1NVS8
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MDLGLEDLETGLLDAEKGIERSESAHSGKHLRVPLLKQRRNTTSQLAIVGSNVCPVESLD
YEIIENDTFKQDWRSRKRVQIFQYVFLKWTLALLIGLCTGFVGFFNNIAVENIAGFKLLL
TNNLMLQQKYVLAFFAYAGCNLVLAAVSATVCAYIAPAAAGSGIPEVKAYLNGVDAHSIL
APSTLFVKIFGSIGGVSAGFVLGKEGPMVHTGACIASLLGQGGSRKYNLTWRWLRYFKND
RDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAIVAVVLRTLI
DFCRSGKCGLFGRGGLIMFDVSSSHVSYSLRDLVPVLILGVIGGIFGSLFNRLLDKLLRT
YSIINEKGPVFKILLTCAISLLTSCCAYGLPWLASCTPCPESLKEPCPTVGRSGNFKSFN
CPPGHYNGLASLFLNTNDDAIRNLLSSTLHEYTIPTILTFFVSIYTLGLLTYGVALPSGL
FIPVILAGASYGRLVGRAIGSSLPDLDPGLFALLGAASFLGGTMRMTVSVCVILLELTNN
LYMLPLLMLVLLISKTVADVFNRGVYDQIVKMKGLPFLEDHAEPYMRQLAASDVVSGPLM
GFSGIEKVGNVVHTLRATGHNGFPVVDEPPLSEVPKLCGLVLRAHLVVLLKGKMFTEGSR
SVGMEEFGRRFGASDFAKAGLGKGLRIEDVELSDKEMEMYVDLHPITNSSPYTVVETMSL
AKAAMLFRQLGLRHLCVMPKTPGGAPIVGILTRHDFMPEHIIGLYPHLRPHK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggatctgggtttggaggatttagagactggcttacttgatgcagagaagggtatagag
aggtcggaatctgcacattcaggaaagcatttgagggtgcctctgctgaaacaaaggagg
aacaccacttcacagttggccatagtaggatcaaatgtgtgccccgtggagagcttggac
tacgagattatcgagaatgatacatttaagcaggactggagatcgaggaagagagtacag
atattccaatatgtatttctcaagtggactctggctcttctcattggactgtgcactggg
tttgtgggcttcttcaacaatatagccgtggaaaatattgctgggtttaagttgttactg
accaataatcttatgctccaacagaagtatgtactagctttctttgcctatgctggttgt
aatttggttttggccgcagtttctgccactgtctgtgcttacattgctccagctgctgcg
ggttccggtatcccagaggttaaagcctatctaaatggtgttgatgctcattctattttg
gcacctagcactctatttgtgaagatttttggttccattggtggggtctcagctggcttt
gttttgggaaaagaggggccaatggtgcacactggggcttgcatagcctccttattgggg
caaggtggttcccgcaagtacaatcttacatggagatggcttcgatacttcaaaaatgac
cgagacagacgggacctcatcacctgtggtgcagcagctggtgttgctgccgcatttcgg
gcaccagttggtggcgtcctatttgcccttgaagaagcagcatcatggtggagaagtgca
cttctttggaggacattctttactacagcaatagtggctgtggtgcttaggaccctcata
gacttttgtcgcagtggaaaatgtggactgtttggaaggggtggcttgatcatgtttgat
gttagttcctctcatgtttcatacagcttacgtgatttggtacctgtattaattcttgga
gtcatcggtggtatctttggtagccttttcaaccgtcttttggacaagcttcttcgaaca
tacagcataatcaatgagaagggcccggtgttcaagatacttctaacatgtgccatctcc
ctcctcacctcatgctgcgcctatggccttccttggcttgccagctgcaccccctgcccc
gaaagcctcaaggagccatgtccaactgttggtcgctcaggcaacttcaagagcttcaac
tgccctcctggccattacaatggccttgcatctctcttcctcaacactaatgatgatgct
atccgcaatctcctctcttctaccctacacgagtacactatccccacaatcctcacattt
tttgtttctatctatacactaggtctcttaacctatggtgtcgctctcccgtctgggctt
ttcatccctgttattctcgctggtgcctcttatggccgtttagttggtcgcgccataggc
tcctcccttcctgaccttgaccctggcctctttgctctcttgggagctgcttccttcctt
ggaggcaccatgcgcatgactgtgtctgtctgtgtaatccttttggagcttacaaacaac
ctctacatgctcccccttttgatgctcgttcttctaatctcgaaaaccgtggctgatgtt
tttaaccgaggtgtatatgatcaaatagtgaaaatgaagggccttccattcttagaggac
catgccgagccatacatgaggcaattggcagccagtgacgtggtctcagggccattgatg
ggcttttcagggattgagaaggtggggaatgtggttcatacgctcagggccacaggccat
aacgggttcccagtcgttgatgagcctccactgtctgaggtcccgaagctctgcgggttg
gtcctgagggctcaccttgtggttcttctcaaagggaagatgtttactgaggggagcagg
agcgttggaatggaggagtttgggaggagatttggggcatcagattttgcaaaggcgggt
ttggggaaggggctgaggattgaagatgtggagctgagcgataaggagatggagatgtat
gtggacttgcacccgatcacgaactcatcaccatacaccgtggtggagacaatgtcattg
gctaaggccgcgatgttattcaggcagctcgggctcaggcacttgtgcgtgatgcccaag
actccagggggggccccgattgtcggaattcttacccgccatgacttcatgccagagcac
atcatcggactctaccctcacttgagaccccacaaataa
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