Amborella trichopoda: 18427747
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Entry
18427747 CDS
T02990
Name
(RefSeq) ELAV-like protein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18427747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18427747
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18427747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
18427747
NCBI-ProteinID:
XP_006836856
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MEAGGTMCQGNKKLVILGIPWEVDDEGLRQYMKQFGELVDVMVMKDRITGRSRGFGYVTF
SSPEDAQKALAVEHSLNGRTLEIKVATPKEEMVPSGRKSTRIFVARIPPSVTDETFHSYF
AKYGLIKDSYMPKDPLSRQHRGIGFVTFENPESVDKLMSETHELEGSTIAVDRATPKDDT
RAYRMSNHHLRTPHFLAMPQMGGYTPVVKDLAALGPIHQPNQIVLPSTFPAQEVPLTGQI
IVAGDTSSSGLGNGQVTVQVPRQVEKKMFVGRIPMETTPEDLQAYFSQFGYVTDVYLPKD
AKKISHRGFGFVTFADEAAAARVTRTRHFIHGREIAIESATPSDRVPSSLGNDSDLPSEM
VGVATENGSVAHSAPPAKWGKKLFVGRIPIEANAVDVRVHFSQYGPVLDVYLPKDDKKLS
HRGFGFVTFADETSAEYACQREHRILGQKIVLDRAAPIEDTQTGMHPSSSVAVEQPSDGS
AQTIVVDDRFKSFANQDAYNMMFQQLRGGVDMDPSRGAQVSRDPRRAARYRPY
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaggaggcacaatgtgtcaagggaataagaagcttgtgatcctgggtattcct
tgggaagtagatgatgaaggtctacggcaatacatgaagcaatttggtgaattggttgat
gtcatggtgatgaaagatcgtataacggggcggtcacgtggttttggatatgtcacattc
tcatctccagaagatgcacaaaaagctttggcggtagagcattctttgaatgggaggacc
ctcgaaatcaaagtggcaaccccaaaggaggaaatggtgccatcaggaagaaaaagtact
cgcatttttgtagccagaatacctccaagtgtgacagatgagacatttcacagttatttc
gcgaaatatggtctaataaaagattcctacatgccaaaggatccattgtcaaggcagcat
agaggaattggatttgttactttcgagaatccagagtcagttgataaacttatgtcagaa
actcatgaactcgaaggctccaccatagctgttgaccgagcaactccgaaggatgacact
agagcatatcgaatgtcaaatcatcatctaaggacaccccattttcttgcaatgccacaa
atgggtggatatactcctgttgttaaagatttagcagcattagggcccatccatcaaccg
aaccagatagttctacctagcacgtttccagcccaagaagtccccttaacagggcagatt
atagttgcaggtgataccagttcatcaggactaggtaatggacaggttactgtccaggtt
cctcgacaagtggaaaagaaaatgtttgttggtcgcattcctatggaaacgacacctgaa
gatctgcaggcatacttcagccagtttggttatgttacagatgtgtatctcccaaaggac
gcaaagaagatatctcacaggggatttggcttcgtcacatttgcagatgaagcggcagct
gcacgtgtaacccgtacgagacactttattcatggccgtgagattgccattgaatctgca
actccttcagatcgagtcccttcatcgctggggaatgacagtgacctgccttctgagatg
gttggtgttgcaactgaaaatggttcagtggctcactctgctccacctgctaaatgggga
aagaagctttttgtcgggcgcatccctatcgaagcaaatgctgtggatgtacgggtgcac
ttcagtcaatatggacctgtcttagatgtgtatttgcccaaggatgacaaaaaattgtca
catagaggatttggttttgtcacatttgctgatgaaacttcagctgaatatgcttgtcaa
agagaacatagaattttaggtcaaaagattgtactggaccgagctgcccctatagaggat
acacaaacgggcatgcacccatcttcgtctgttgcagtggaacagccatcggatgggtca
gctcaaacaattgtcgtagatgatcgcttcaaaagtttcgctaatcaagacgcctacaac
atgatgttccaacagttgagaggtggtgtggatatggacccttcgcgtggtgctcaagtg
agccgcgaccctagaagagcagcccgataccggccgtactaa
DBGET
integrated database retrieval system