KEGG   Amborella trichopoda: 18427747
Entry
18427747          CDS       T02990                                 
Name
(RefSeq) ELAV-like protein 1 isoform X1
  KO
K14411  RNA-binding protein Musashi
Organism
atr  Amborella trichopoda
Pathway
atr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    18427747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18427747
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     18427747
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 RRM_PARP14_3 RRM_Nup35
Other DBs
NCBI-GeneID: 18427747
NCBI-ProteinID: XP_006836856
LinkDB
Position
Unknown
AA seq 533 aa
MEAGGTMCQGNKKLVILGIPWEVDDEGLRQYMKQFGELVDVMVMKDRITGRSRGFGYVTF
SSPEDAQKALAVEHSLNGRTLEIKVATPKEEMVPSGRKSTRIFVARIPPSVTDETFHSYF
AKYGLIKDSYMPKDPLSRQHRGIGFVTFENPESVDKLMSETHELEGSTIAVDRATPKDDT
RAYRMSNHHLRTPHFLAMPQMGGYTPVVKDLAALGPIHQPNQIVLPSTFPAQEVPLTGQI
IVAGDTSSSGLGNGQVTVQVPRQVEKKMFVGRIPMETTPEDLQAYFSQFGYVTDVYLPKD
AKKISHRGFGFVTFADEAAAARVTRTRHFIHGREIAIESATPSDRVPSSLGNDSDLPSEM
VGVATENGSVAHSAPPAKWGKKLFVGRIPIEANAVDVRVHFSQYGPVLDVYLPKDDKKLS
HRGFGFVTFADETSAEYACQREHRILGQKIVLDRAAPIEDTQTGMHPSSSVAVEQPSDGS
AQTIVVDDRFKSFANQDAYNMMFQQLRGGVDMDPSRGAQVSRDPRRAARYRPY
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggaagcaggaggcacaatgtgtcaagggaataagaagcttgtgatcctgggtattcct
tgggaagtagatgatgaaggtctacggcaatacatgaagcaatttggtgaattggttgat
gtcatggtgatgaaagatcgtataacggggcggtcacgtggttttggatatgtcacattc
tcatctccagaagatgcacaaaaagctttggcggtagagcattctttgaatgggaggacc
ctcgaaatcaaagtggcaaccccaaaggaggaaatggtgccatcaggaagaaaaagtact
cgcatttttgtagccagaatacctccaagtgtgacagatgagacatttcacagttatttc
gcgaaatatggtctaataaaagattcctacatgccaaaggatccattgtcaaggcagcat
agaggaattggatttgttactttcgagaatccagagtcagttgataaacttatgtcagaa
actcatgaactcgaaggctccaccatagctgttgaccgagcaactccgaaggatgacact
agagcatatcgaatgtcaaatcatcatctaaggacaccccattttcttgcaatgccacaa
atgggtggatatactcctgttgttaaagatttagcagcattagggcccatccatcaaccg
aaccagatagttctacctagcacgtttccagcccaagaagtccccttaacagggcagatt
atagttgcaggtgataccagttcatcaggactaggtaatggacaggttactgtccaggtt
cctcgacaagtggaaaagaaaatgtttgttggtcgcattcctatggaaacgacacctgaa
gatctgcaggcatacttcagccagtttggttatgttacagatgtgtatctcccaaaggac
gcaaagaagatatctcacaggggatttggcttcgtcacatttgcagatgaagcggcagct
gcacgtgtaacccgtacgagacactttattcatggccgtgagattgccattgaatctgca
actccttcagatcgagtcccttcatcgctggggaatgacagtgacctgccttctgagatg
gttggtgttgcaactgaaaatggttcagtggctcactctgctccacctgctaaatgggga
aagaagctttttgtcgggcgcatccctatcgaagcaaatgctgtggatgtacgggtgcac
ttcagtcaatatggacctgtcttagatgtgtatttgcccaaggatgacaaaaaattgtca
catagaggatttggttttgtcacatttgctgatgaaacttcagctgaatatgcttgtcaa
agagaacatagaattttaggtcaaaagattgtactggaccgagctgcccctatagaggat
acacaaacgggcatgcacccatcttcgtctgttgcagtggaacagccatcggatgggtca
gctcaaacaattgtcgtagatgatcgcttcaaaagtttcgctaatcaagacgcctacaac
atgatgttccaacagttgagaggtggtgtggatatggacccttcgcgtggtgctcaagtg
agccgcgaccctagaagagcagcccgataccggccgtactaa

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