KEGG   Amborella trichopoda: 18427767
Entry
18427767          CDS       T02990                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 16 isoform X1
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atr03041]
    18427767
Spliceosome [BR:atr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    18427767
 Complex B
    18427767
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4
Other DBs
NCBI-GeneID: 18427767
NCBI-ProteinID: XP_020519018
LinkDB
Position
Unknown
AA seq 760 aa
MREIPAAETLAGLCRKEKRKAVKRLKRKQLRKETALKEREEEEARANDPEEQLRMRVREQ
EEAERLERERNEFDERERLWIEAAKKRAEEEETRKALEESERKQIDQDNNGAEENDSWEY
VEDGPAEIIWKGNEIIVRKKRIKVPKRNSSQGKIQEDVDKPKFNPLPPQSAAFADHKKME
SLPLQTIESVAQQIPNFGTEQDKAHCPFHLKTGTCRFGTRCSRVHFYPDKSCTLLIKNMY
NGPGLAWEQDEGLEYTDEEMERSYEEFYEDVHTEFLKFGEIVNFKVCRNGSSHLRGNVYV
HYRSLDSAILAYNSINGRYFGGKQITCEFVGVTRWKVAICGEYMKSRHKTCSRGSACNFI
HCFCNPGGDYEWADWDSQPPRYWIKKMEALFGPSLYWEELQYDKHSELQRSSSRKTSNET
SVTCRYHSSRSKSRDAARWSNESDADFERKRGSTPSRDGAGYDKRRERLNHSRSRIMSTV
NGSRTSRFKSHEAAQWSDDSDEGYEIKQGSTPSRDETEYDTRERRRHSSTRRMSSVKESK
SHETDRWSDQWSNESDGDYEEKMGPTPSRDVAGYDKRREGQKHSSSKRISWAKGHHSCRS
ESHESDQCSDGSGEHSDKSAVNQEEERHRKHRELQKHSRRKTSRSTSHHSRRSLSSEAKA
REGDSSEDNERSPSSLSEEVGYQKNRELRKYSSKRKSSRHGRAHTKHARSSWDCGQDGDS
DGNEGPSHSNRRSPLEEGYSDHKRHKHSRKHISVNGGHEH
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgcgtgagatcccggcggctgaaaccctagctggtttgtgtcgaaaagagaagaggaaa
gcagtaaaaaggttgaagaggaagcagctaagaaaggagactgcgttaaaggaaagggaa
gaggaggaggctagggcaaatgatcctgaagagcagctgcgaatgagggttagggagcag
gaagaggcggaaaggttggaaagagagagaaatgagtttgatgagagagagaggctttgg
attgaggctgcaaagaagagggcagaagaagaggaaacgaggaaagccttggaagaatca
gagaggaagcagatagatcaggataataatggggcagaggaaaatgatagttgggagtat
gttgaagatggtccagctgaaattatctggaaagggaatgagattattgtgagaaagaaa
aggatcaaggtgcctaagagaaatagcagccagggaaaaatccaagaggatgtcgacaag
cctaagtttaatcctcttcctccacagtctgcggcttttgctgaccacaagaagatggag
tccctcccactccagacgattgaaagtgttgcccaacaaattccaaactttggaactgag
caagataaagctcactgtccatttcacctcaaaactgggacttgccgttttgggacccgg
tgtagtagggtgcatttttacccagataaatcttgcacattgctcataaagaatatgtac
aatggacctgggctggcctgggaacaggatgaagggctcgagtacactgatgaagagatg
gaacgaagctatgaagagttctatgaagatgtgcatacggagttcttgaaatttggggaa
attgtgaatttcaaggtttgtagaaatggatcttcccatctccgtggcaatgtttatgtg
cattataggtccctggattctgcaattcttgcatataattcaatcaatggccggtacttt
ggtggaaaacagataacatgtgagtttgttggagtgacccgatggaaggttgcaatatgt
ggagaatacatgaaatcaaggcacaagacttgctctcgtggaagtgcttgcaattttatt
cattgtttttgcaaccctggtggagattacgaatgggcagactgggatagccagcctcca
agatactggattaagaaaatggaggccttatttggtccttcactttactgggaagaattg
caatatgataagcattcagagcttcagcgctctagctctaggaaaacatcaaatgaaaca
agtgtgacttgcaggtatcacagttcaaggtctaaatcgcgtgacgctgctcgatggagc
aatgagtcagatgcagattttgaaagaaaaagggggtccacaccaagccgagatggagca
ggatatgataaaagaagagaaaggctaaatcactctaggagtaggataatgtctactgtc
aatgggagtcgcacttcaaggtttaaatcacatgaggctgctcaatggagcgatgactca
gatgaaggttatgaaataaaacaggggtctacaccaagccgagatgaaacagaatatgat
acaagagagcggcgcagacactctagcactaggagaatgtctagtgtcaaggagtctaaa
tcgcatgaaactgatcgatggagcgatcaatggagcaatgagtcagatggagattatgaa
gaaaaaatggggccaacaccaagccgagatgtagcaggatatgataaaagaagagaggga
caaaaacactccagtagtaagagaatatcttgggccaaagggcaccattcttgcaggtct
gagtcacatgagagtgatcaatgcagtgatggttctggtgaacactctgataagagtgcg
gtgaaccaagaagaggagaggcaccgtaaacatagagagttgcaaaagcactctcggagg
aaaacctcccgcagcactagccaccactctagaaggtctttatctagtgaagctaaagca
agggaaggtgattcgagtgaagacaatgagaggagtccatcgtcattgagcgaagaagtg
gggtatcagaagaacagagagctgcgaaaatactctagcaagagaaagtcatctagacat
ggcagggcccacaccaagcatgctagaagttcatgggattgtggacaagatggagattct
gatggaaatgaaggcccttctcatagcaatcgaaggtcccctctagaggaaggctatagt
gaccacaagaggcacaaacactccagaaaacatatatctgtcaatggtggtcatgaacac
tga

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