Amborella trichopoda: 18427802
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Entry
18427802 CDS
T02990
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18427802
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
18427802
TFIIIC, fungi type
18427802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_16
TPR_2
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_7
TPR_9
TPR_1
TPR_17
ANAPC3
TPR_20
NatA_aux_su
TPR_15
TPR_11
RPN7
TPR_21
ARM_TT21_2nd
Suf
ARM_TT21_5th
HAT_PRP39_C
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
18427802
NCBI-ProteinID:
XP_020518984
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MEEAEAPRSLSEDMEASVVEEEINEGINDESANEESINEDEVNDEDVEEEEDECFALFEG
DMDPLGFADANESVIETFEKFERLEYEALAERKRKGITDSSGESSKRPRQENLFGANIEE
IEEVMRYGSGRKSSEPKKRGRKKGSKKKLSPEVTRKIMDANIHYTFGRYDEAVSLLTEIV
RLAPSVADSYITLGIIYNDRGDKKRAKNFYSLAAYLTPKNPKLWECLITLSKELGDMVQV
NYCFSRAIKANPEDLSLAFLLASHYSELGDYPKAAESYDRILKLCPGNVEACKLAAEMYH
SCGQVERAISILENFIKEHPEDADLTVVRSVAALNMENKDYLKALKHIEAAKVVYCSGKV
LPCDLIVKAGICEAYLGHMEKAEEHFGILQKERVKDLSELTLEVAESLANIGHHDIALNY
FMMLEGTAGCGNESFFLKVAQSYSALKDTENAIQFFYKAINASNNNIDARLTLTSLLLEK
NKEDEALKLLSPPEIMDSNNTHDSVKSEPWWLSGKIKKQLAYMYHRKGMLVEFLNTIFPL
IEETLSIEVNKIKKVRPRRKLTQKDLLKRIEVLKDCDGDNLIRGARLPIPQKEVIKANRA
KKLLPKRAMEEEEAKAAALAAGMMWKSDDSDIEPLETTKEPPLPGLLKDEEHYQLLLNVC
KALSSLQRDWDAFTTISSTLNLVDSTFPNEKKEELQSLRAKVAYNTSDPNYGCICAKEIV
RRRPHSIAAWNWFYKVLSRFMEHRKEILLLHAQKVQSPFVNSDSIKR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcagaggcacctcggagtctttccgaggatatggaagcctcagttgtagaa
gaagagatcaatgaaggcattaatgatgaatccgccaacgaagaatctattaatgaagac
gaggtcaatgacgaagacgttgaagaagaggaagatgaatgctttgctttattcgaaggg
gatatggatcctctagggtttgctgatgccaatgaatcagtaatcgagacatttgagaag
tttgagaggcttgagtatgaagccttggctgagcgcaagcgcaagggaatcactgatagt
agcggtgagtctagtaagaggcctagacaagagaacctatttggtgcaaatattgaagaa
attgaggaagtgatgcgttatggttcaggccggaaatcctctgaacctaagaagagggga
cggaagaagggctcaaagaaaaaacttagcccagaagtgacgaggaaaattatggatgct
aatatccattatacatttggccgctacgatgaggcagtaagtttgttgactgaaattgtg
cggcttgctcctagtgtggcagattcttacattactcttggtatcatttacaacgaccgc
ggggataagaaaagagcaaaaaacttctacagtcttgctgcgtatttaactcccaagaat
cccaagctatgggaatgcctcataactctgtccaaggaacttggagacatggtgcaggtg
aattattgttttagtagagcaataaaggcaaatccggaagatttgagccttgcatttctt
cttgcttcacattatagtgaacttggggattatccaaaagcagcagaatcatatgatcga
atactaaagctctgtcctggaaatgtcgaggcatgcaaattggctgcagagatgtatcac
agttgtggccaggttgaaagggctatcagtattctggaaaactttattaaagagcatccg
gaagatgctgatttgactgtagttagatcggtagcagctctgaatatggaaaacaaggac
tacttgaaagcacttaaacatattgaggctgcaaaggtggtttactgctctggcaaggtt
ttgccatgtgatttaattgtcaaggctggaatttgtgaagcatacctcggacacatggaa
aaagcagaggagcattttgggattctgcaaaaggagcgtgttaaagatctttctgagttg
acactcgaagttgctgaatctttagctaatattggacatcatgatattgcactgaactat
ttcatgatgttggaagggactgctggctgtggcaatgagtctttctttctaaaggttgca
cagagttattcagccttgaaggacactgaaaatgctattcagttcttctacaaagctata
aatgcttcaaataataatattgatgctcgtttaactttaacatctcttcttctcgaaaag
aacaaagaggatgaagccctgaagttacttagccctcctgaaattatggattcaaataat
acacacgattctgtcaaatctgaaccttggtggctcagtgggaagataaaaaagcagctt
gcttatatgtatcatagaaaaggaatgcttgtggagtttcttaatacaatctttcctctg
attgaagaaacattgtctattgaggtcaacaagattaagaaggttcggccaaggagaaag
ctcactcagaaagatcttcttaagaggatcgaggtgttaaaagattgtgatggtgataat
ttgattcgtggggctaggcttcccattcctcagaaagaagtgatcaaggcaaatagggca
aaaaagttgcttccaaagcgggcaatggaggaggaagaagcgaaggctgcagcattggct
gcaggaatgatgtggaagagtgatgattcagatattgaacctctggagacaacaaaagaa
cccccactacctggactgcttaaggatgaagagcattatcagcttcttttaaatgtatgt
aaagcactttcttctttgcaacgtgattgggatgcatttacaaccataagtagcactttg
aacttagttgatagcacttttcctaatgaaaagaaagaggagcttcagtcattacgtgct
aaagttgcttataatacaagtgatccaaattatggatgcatctgtgcgaaagaaattgtt
cgacgacgtcctcacagcatagctgcctggaattggttttataaagtcctatcaagattt
atggaacatcgaaaggagattcttctgttacatgctcaaaaggtgcaatctccctttgtg
aattcggactcaataaagaggtag
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