Amborella trichopoda: 18427816
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Entry
18427816 CDS
T02990
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18427816
03036 Chromosome and associated proteins [BR:
atr03036
]
18427816
Spliceosome [BR:
atr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
18427816
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
18427816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
TPR_15
Motif
Other DBs
NCBI-GeneID:
18427816
NCBI-ProteinID:
XP_020519015
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MASPVSPSNGETVNPNLSSIGETLETKQIDPSQYAYEDFEDADDLSSEEHGRKSSSSDSE
SEEEDKEKVLETLEKAVAENPREYDSHVQYIKALRKVGHIEKLREARESMQRYFPLTPTM
WQEWAKDEASLNTGSEAFALVEKIYEQGVEEYLSVSLWCDYLNFIQENDPSVSQCTSAGV
AKMRTLFEKALVAAGLHVAEGSKIWGAYREFEQAYHLIIDDHDVEEKAKQVERIRSIFRR
QLAVPLTGLGLVLDEYKLWEMQQGENVSDDLEWIPPNVAAAYQKALQMCNARIRHEELIS
SQNTSAEEKLHHFLAYIKFEESSGDPIRVQLLYERAIADFPISSDLWLGYTSYLDKSLKV
SSIIKSVYSRTIRNCTWKGELWTRCLLALERFGASEEELCSVFEQSLQCSFSTIEEYLDL
FLTRIDGLRRRILQLGTTDAETYYALIRDTFQRARDYLSQQLSPETMTTYMDYLLRLHAY
WARLESRLLKDQGAARSVWESLIKTSGSALEVWQGYINMEIELNNIHEARFIYKRCYSKR
FQGYGSEEICHSWLRFEREFGNLEDLDHAIKKVTPRLEELQLFRIQQEEKSQSLPGPIFS
AQPTNSHTRNERSGGHDAKKRKPDDAKKRKPGIGFADKEPYSKRHKDATGRASKGDGHQD
TGPTNKPESSSISKGVSPEGIAKEQLAREQKGDKSKKSLYTDQCTAFISNLNLQATEENL
RQFFSDCGGIKAVRLLLDKFTGKSRVCTPLHVNCSACVLFFWMGGSISRERCFFRVCGFF
HVLGPVFGSFLPIRYPFG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcctgtttctccatcaaatggcgaaaccgtaaaccctaacctttcctcaatc
ggtgaaaccctggaaacaaaacaaattgatccatctcagtacgcatatgaggattttgag
gatgcagatgacctttcatctgaagaacatggaagaaagagctctagttctgattcagag
tcggaagaagaagataaggagaaagtactggaaacccttgaaaaagcagtcgcagaaaac
cctagagaatacgattctcatgttcagtacataaaagccttaaggaaagttggtcatatt
gagaagcttcgagaggctagggaatctatgcaaagatattttccactgactcctacaatg
tggcaagagtgggcgaaggatgaagcttcactcaatactggttcagaggcttttgctcta
gttgaaaagatatatgaacaaggagtggaggaatatttgtctgtttctctttggtgtgat
tatttgaatttcattcaagagaatgatccatcagtcagccaatgtacatcagctggtgtg
gcaaagatgaggactctgtttgagaaagcccttgttgcagctggtcttcatgttgctgaa
ggcagcaagatatggggcgcatatcgggagtttgagcaagcttatcaccttattattgat
gaccatgatgtagaggaaaaagctaaacaagtggaacgcatccgaagtatattccgccgt
cagttagccgtcccactcactggcttaggtttggtgcttgatgaatacaagctttgggag
atgcaacaaggagaaaatgtttctgatgatcttgaatggattcctccaaatgttgctgca
gcatatcagaaggctctgcagatgtgtaatgctcgtattcgtcatgaggagttgatttca
agtcagaacacttctgctgaagagaagcttcaccactttttggcttacataaaatttgag
gagtcttcaggtgatccaattcgagtccagcttctatatgaacgtgctattgcagacttt
ccaatatcaagtgatctttggcttggctataccagctatcttgacaaaagcttgaaggta
tctagtatcataaaatctgtttattctaggaccataagaaactgtacttggaaaggagaa
ctttggaccagatgcttgcttgctttagaacgctttggtgcctcagaagaagagttgtgc
agtgtttttgagcagtctttgcagtgctctttttcaactattgaagagtatctagatttg
tttctcactcgcattgatgggttaagacggaggattctacagcttggtacaactgatgct
gagacctactatgctttaattagagacacttttcagcgtgctagggattatttatctcaa
cagttgtctccagagacgatgaccacatatatggattacttgctgcgattgcatgcttat
tgggctagactagagtctaggcttctaaaagatcagggcgcagctcgtagtgtttgggag
agtttaattaagacaagtggctcagcattggaggtctggcaaggttacataaatatggaa
atcgagttgaataatatacacgaggcaaggttcatttacaaaagatgctacagtaaacgg
tttcaagggtatggctcagaggagatctgccattcgtggttgcgatttgaaagagagttt
ggaaacttggaagatttggaccatgctatcaagaaggtcacacctcgtctagaagagctg
caattgtttcgaattcaacaggaggaaaaatctcaaagtctcccaggtccaatattttca
gctcaaccaaccaactcccatactcgaaatgagagaagtggtgggcatgatgcaaagaaa
aggaaaccagatgatgcaaagaaaaggaaaccaggtattggatttgctgataaggagcct
tattcaaagcggcacaaagatgcaacaggtagagcgtccaaaggagatggacatcaagat
acgggacccaccaataaaccggagtcttcctcgatttccaaaggcgtttcacccgaagga
attgcaaaagaacaactggcaagagaacaaaaaggcgataaatctaagaagagcctctac
actgaccaatgcactgcattcatttctaatcttaatcttcaggcaacagaagaaaatctg
aggcagttcttcagtgattgtggtggcataaaggctgtccgtttattattggacaagttt
actggcaaatcaagggtatgcacacctcttcatgttaactgctctgcatgtgttttattt
ttttggatgggtgggagtatatcgagagagaggtgtttctttcgtgtgtgcgggtttttt
catgttttggggccagtatttggttcttttttaccaattagatatccttttggatag
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integrated database retrieval system
