Amborella trichopoda: 18427934
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Entry
18427934 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18427934
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
atr03037
]
18427934
Cilium and associated proteins [BR:
atr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
18427934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SCAPER_N
Motif
Other DBs
NCBI-GeneID:
18427934
NCBI-ProteinID:
XP_020519149
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MHRQQPSKDHRRMANPNISRKESGKDLACLEKAVLNHKNEQFGPVSGQTEVLNGQPDTAS
AFCKEPGKKDLACVEKTVVNHNNEQFGPEPGIGSCSKLSSTSIVAVNRDQIKTVEEAPHK
DNLNTLESKVNDVYRIKWGNLDSDVIPPCKNLGNSIETVAKTIDVSGDSIRCFNVSNSSL
EGNTSHSIENSSEKMIITNANGPKKIDDAAPLSASRKCCISDFEHVESISSKVPDGFDIL
PVESSYSFAIGKSVVMSEAITCIAGKTQEARPKEEAIISISGEIQEETPKEAIIVISEET
QGGKHKEKAITTTFGETQEEKLKEEAITCRFGETQDKKPKEEASTSIYGETQKEKPKASI
SSISGKSQEEKPKEEALTSISARTHKEENNNIHEDIAVDVTEKLEVSEDGVVDVKKLETM
NPESVSNVFKLTQKDNNCSIREDASMEIPDVEVSKDSKQLASDVNEVEDASVCVENQRPK
ELLDTQMMDGLGDGEAGESKERFRQRLWCFLFENLNRAVDELYLLCELECDKEQMAEAIL
VLEEASSDFRELKSRVEVFESSKKIPSQSSSRGPPANVKADHRRPHALSWEVRRMSNSPQ
RAEILSSSLEAFKKIQEERARRPPTHDGKGIQSKDPNLLQVNKDPQRNYPEKSDTMPSAR
EVRLRKQSSVPSDYVQGSSVGEKRLSKSSHISLLPVKDGPLALDASKSKQESTGSVPEME
KLVPKRDKASIDNRVDKGSKPVDSLKRQVTDKEKEKEKKSPTPWKSMDAWKEQRNWQDIL
SSPMSSTARVSYSPGLGRRSADARAKVLHNKLMSPERKKRSALDMKREAEEKHTRAMRIR
AELENERVQRLQRTSEKLNRVNEWQAVRSTKLREGMHARHQRSESRHEAYLAQVVRRAGD
ESSKVNEVRFITSLNEENKKLMLRQKLQDSEMRRAEKLQIIKTKQKEDMAREEAVLERRK
LLEAEKLQRIAETQRKKEEAQVRREEERRATSAAREARTVEQLRRKEVRAKAQQEEAELL
AQKLEERLRESELRRKFYFEQIRERASMDYRDQSPSLRRSSIKEGQSRSNGAGEDYPVNC
VGSTLGFGNASQQQPLRRRIKKIRQRLMALKSEFVEPPVGVESGGIGSRAQAGSARAKIG
RWLQDLQRLRQARKEGTASIGLIVGDMIKFLENKEPELHACRQSGLLDFIAAALPASHTS
KPEAGQVTLYLLQLLKVVLSLSANRGYFLSQNLLPPIIPMLSTALENYIKITASSNSNGS
MANSLGSKTSAENLDSVAVVLDGFLWSVTIIMEHAFSDENHLQMRDGLMELIISYQVVHR
LRDLFSLFDRPQVEGSPFPYPILSSLNLLAILTTRSRTISSINWEAYSLKIITADQVHET
NVAQSSEPNSGSSSSEMKSYVEDLPGYLPPTIVKEQPNECENLSPKNVTSLVEPAVKEDR
FGEIPTDIQSNLQADVEVLPMASTVADVGDTTHNLVKEEYSGPNIPQKNEKNTVCFAGEP
DDHSQQTNNNGQEASLKQPTEYLVSVFAETGLVSLLSLLTGVLLQANNKQSSEQAAYTLP
LNFEETAIGVLRVLNNLALLDLPLLQKMLARPDLQMEFFHLMSFLLSHCASKWKGSTDEV
GLLLLQTLSLLGYFAIFHPGNQAVLRWGKRPTILHKVCDLPFVFFSDPGLIPILGGTLVA
ACYGCEQNRGLIQLELSTDMLLSLLKSCKSYLSSLENATTDEPLVDNSNIAPAIEPKKIS
SDLPVKSSRHNPMNSRAMVGKSSVLGRTGKYGKVKSCTSHRDAKGMKVCEEWPPKRSLPV
SEVSSSLMLHSRFPSSFLDRAEEFFASCEY
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggcaacaaccctcaaaagaccaccggcgcatggcaaacccaaatatatcccgt
aaagaatcaggaaaagacttggcttgccttgaaaaggcagtgttgaatcacaaaaatgag
caatttgggcctgtttctggccaaactgaggtccttaacggccagcctgacacggcaagt
gcattctgtaaagaaccaggaaagaaggatttggcttgtgttgaaaagacagtggtgaac
cacaataatgagcaatttgggcctgaacccggtattggctcatgtagcaaactatctagc
acttcaatagtcgcagttaatcgggatcaaattaagacagtggaagaagctcctcataag
gataacttaaacactttggaatctaaggttaatgatgtttatagaattaagtgggggaat
ctcgatagtgatgttattcctccatgtaagaatctggggaattccattgaaacagttgca
aagactattgatgtatctggggattccataaggtgttttaatgtttcaaattcttctttg
gagggtaatacctcacattccattgaaaattcttctgaaaagatgatcataaccaatgca
aatggcccaaagaagattgatgatgctgctcctttaagtgcttctaggaagtgttgcatt
tctgattttgagcatgttgaatccatcagtagcaaagttccagatggttttgacattcta
ccagttgaaagttcttattcatttgccattggtaaatcggtagtcatgtctgaagctatt
acttgtattgctggaaagacccaagaagcaagacccaaagaagaagctattattagtatt
tctggagagattcaagaagaaacacccaaagaagccattattgttatttctgaagagacc
caaggaggaaaacataaagaaaaagccattactactacatttggagagacccaagaagaa
aaactcaaagaagaagctattacttgtaggttcggcgagacccaagacaaaaaaccgaaa
gaagaagcctcgactagcatttatggagaaacccaaaaagaaaaacccaaagcatctatt
agtagtatatctggaaagagccaagaagaaaaacctaaagaggaagctcttactagcatt
tctgcaaggacccataaagaagaaaataataatattcatgaggatattgctgtggatgtt
actgagaaattagaagtttctgaggatggtgttgtagatgtcaagaaattagaaacgatg
aatcccgaatctgttagtaatgtttttaagcttacccaaaaggataataattgtagcatt
cgagaagatgcttccatggaaattcctgatgtagaagtgagtaaggactccaaacaactt
gctagtgatgtcaatgaagtagaagatgcttcagtttgtgttgaaaatcaaagacctaag
gaattgttggacacacaaatgatggatggtcttggtgatggtgaagctggtgaaagcaaa
gaaaggtttaggcaacggctttggtgctttctcttcgagaatctgaacagagcggttgat
gaactttatcttttatgtgagctagaatgtgataaggagcaaatggcagaggctatactt
gttctagaagaagcttcatctgattttagagaattgaagtctcgggtggaagtgtttgag
agctcaaagaagatcccttctcagtcttcatctcgcgggcctcctgcaaatgtgaaggct
gatcaccgaagacctcatgccctttcttgggaggtgcgcagaatgtctaactcacctcaa
agggcagaaatactgtcttcatctcttgaggccttcaaaaagattcaagaggaaagagcc
agaaggccaccaacacatgatggaaaagggattcagtctaaggatccaaaccttttgcaa
gtcaataaggatcctcagaggaattatcctgaaaaaagcgacacaatgccaagtgcgaga
gaagtaaggttgagaaaacagtcctctgttccttcagattatgtgcaaggaagttcagtg
ggagagaaacggctctctaaatcatcccatatttcgctgttacctgtgaaggatggcccc
ttagctcttgatgctagcaaaagcaagcaggaatctactgggtcggttcctgaaatggag
aagttggttcctaagagggataaagcatcgattgacaatcgagttgacaaaggctccaaa
cctgttgattcactgaagaggcaggtaactgacaaagaaaaggagaaggaaaagaagtcc
ccaacaccatggaaatcaatggatgcatggaaggaacaaaggaactggcaagatattttg
tcttctcctatgagtagcactgctagggtttcatattcccctggcctcggaagaagaagt
gctgatgctcgtgctaaggttttgcacaataaattgatgtctcccgagaggaagaagagg
agtgctttggacatgaagagagaagcagaggaaaagcatacccgtgcaatgagaattaga
gcagagttagagaatgagagagtccaaagacttcaacgaacgtctgagaaattgaatcga
gtcaatgagtggcaggcggtgcgaagcaccaaactaagagaaggaatgcatgctagacat
caacgtagcgaatctcgacatgaagcctatctcgcccaagttgtgagaagagccggcgat
gaaagcagtaaggttaatgaggttcgattcattacttcacttaatgaggagaacaaaaaa
cttatgcttcgccaaaagcttcaagactcggaaatgaggagagccgagaagcttcagatt
attaagaccaagcaaaaagaagacatggcaagagaggaggctgtgttggaaaggagaaaa
cttcttgaggctgagaagctgcagcgtattgccgaaacccaacgtaaaaaagaggaggcg
caagtgaggagggaggaggaacgaagggccacaagtgcggctcgtgaagcaaggacagtg
gagcaacttaggaggaaggaagttagggcaaaagcccaacaagaggaagcggaactttta
gctcaaaaattggaggaaagacttagagagagtgagctgcgtcgaaaattttacttcgag
cagattagagagagagcctctatggattatagagaccaatctccttcacttaggcgttct
tccattaaggagggacaaagcagatcgaatggagctggggaagattatccagtgaactgt
gttggttctacacttgggtttggtaatgcatcacagcagcagcctttgaggagaaggatt
aaaaagattaggcaaaggcttatggctctgaagtctgaatttgttgaacccccagtaggt
gttgagagtggaggaattggctctagagctcaagcaggatctgcaagagcaaagattggg
agatggcttcaggaccttcaaaggcttcgacaagcaagaaaagaagggacagcaagcatc
ggattgattgtgggagatatgattaagttcttggagaacaaagaaccggagcttcatgcg
tgtcgccaatctggattgctggattttatagctgctgcgttgcctgcttcgcacacttca
aagcctgaagcaggccaggtgactttatatcttttgcaacttctaaaagtggttttatct
ttgtcagcaaatcgaggttattttctctctcaaaatcttttgcccccaattattcctatg
ctttctaccgctcttgaaaactacatcaagatcacagcatcttctaattctaatgggagc
atggcaaactcacttggaagcaaaacttcagctgagaatttggattctgttgctgttgta
ttggatgggttcttatggtcggttacaatcattatggagcatgcattttctgatgaaaac
catcttcagatgcgggatggtttgatggaactgataatttcctaccaagtcgttcatcgt
ctccgtgatctgttctccctttttgataggccccaagttgaaggatccccatttccttat
cccatactttcgagcttgaacttgttggcaattttgacaaccaggtcaagaaccatttct
tctatcaattgggaagcttattcgttgaaaataataacagcagatcaggtacatgaaact
aatgttgcacaaagctcagagccaaattcggggtcttcctcctctgaaatgaaaagttat
gttgaagacttaccaggctatttgcctcccacaattgtaaaagaacagccaaatgaatgt
gaaaatttgtcacccaaaaatgtcacttcacttgttgagcccgccgttaaagaagataga
tttggggaaattccaactgatattcagagtaacttgcaagctgatgtggaagtgttgcct
atggcttcaacggttgcagacgtcggggatacgacccataatttagtaaaggaagaatat
tcagggcccaacattcctcagaagaatgagaagaatactgtatgttttgctggagagcct
gatgaccattctcaacaaactaacaataatggacaagaagcaagcttgaagcagccaact
gaatatcttgtctctgtgttcgctgaaacaggccttgtcagccttctttcactgttaact
ggtgttctattgcaggctaacaataagcaatcatctgaacaggcagcatacacccttcca
ttgaattttgaagagacagcaattggggtattgagggtgttgaataacttggctctcttg
gatttgcctcttctgcagaagatgcttgctcggccagatttgcagatggagttcttccac
ctgatgagtttccttctttctcactgtgcaagcaagtggaaaggatccactgatgaggtt
ggtttgcttcttcttcaaaccttgtcactcttgggttactttgcgatatttcaccctggc
aatcaagcagttctccgctggggcaagagaccaactatccttcacaaggtgtgtgatctg
ccattcgtgttcttcagtgaccccggcctgattcccatattgggtggcacactagtggct
gcttgctatggttgtgagcaaaacaggggtttgatacaactggaactcagtacagatatg
ttgctttccttgctcaaatcttgtaaaagttatttatcttctttagagaatgcaacaact
gatgagcctttggttgataatagtaatattgctccagctatagaacccaagaaaatttct
agtgatcttcctgttaaatcaagccgacataatcctatgaattcacgggcgatggtgggt
aagagtagtgttttaggacggacaggcaaatatggaaaggtgaaaagttgcaccagtcat
agagatgcaaagggtatgaaagtttgtgaagaatggccccctaagcgtagtcttcctgta
tcagaggtttcctcttctcttatgctgcatagtaggtttccaagcagctttctggataga
gcagaagagttctttgcatcctgtgagtattga
DBGET
integrated database retrieval system
