Amborella trichopoda: 18427937
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Entry
18427937 CDS
T02990
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
atr
Amborella trichopoda
Pathway
atr00531
Glycosaminoglycan degradation
atr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
18427937
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
atr00536
]
18427937
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
18427937
Glycosaminoglycan binding proteins [BR:
atr00536
]
Heparan sulfate / Heparin
Enzymes
18427937
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
18427937
NCBI-ProteinID:
XP_006837042
UniProt:
W1NX76
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MTVRIFFFSLFLLSWVPLNFAEEVLVKVKSVNTIAHTDDNFVCATLDWWPSDKCNYGECP
WIEAGILNLDLENPNLGKAIKAFNPLRVRVGGSLQDQVVYHVGKVKKCPHFKIKGDGLFG
FSKGCLPMDRWNALHHLLSDNGALVTFGLNALYGRQQHPNKTEWTGPWDSSNARDFINYT
ISNAQKIDSWEFGNELSGSGIAASVNPTQYGQDLIDLKKVVTELYNSSSMPQPKILAPGG
FFDRDWFIKLLESSGSGVVDVLTHHIYNLGAGNDPIVPNRMVDPFYLSEIAETYKSIQLT
IQDFGPWSAAWVGEAGGAYNSGGPNVSNAFIDSFWYLDQLGMTSSYNHKAYCRQSLVGGN
YGLLDTTTFVPNPDFYSALLWHRLMGKRVLGVEVDNAPYLRAYAHCAKNKAGVMLLFINL
SNSTTFNVSMENDMNIFTTSSSDKVAKDVVSQTGSKREEYHLTPKNGNIFSRVMLLNGSP
LELTKAGEIPAISPLSIDSDSPILIAPRSIAFVRLPDFKAPACA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaggatcttcttcttctctctatttcttctctcatgggttcctctaaatttt
gcagaggaggtgttagttaaggttaaaagtgttaacacaattgctcatacagatgataat
tttgtgtgcgcaactctagattggtggccttcggataagtgcaactatggcgaatgtcca
tggattgaagctggtatcctcaatctggacttggagaatcctaatcttggcaaggcaatc
aaggcttttaatccattgagggttagagttggagggtcattgcaagatcaggtggtgtac
catgttgggaaggtgaagaagtgcccccacttcaagatcaagggtgatggattgtttgga
ttctcaaaaggatgcctgcctatggatagatggaatgccctccaccatttgctatcagat
aatggagccctcgttacatttgggttgaatgcactgtatggaaggcaacaacatccaaac
aaaactgaatggactggcccatgggactcatccaacgctcgtgatttcatcaattacacc
atctccaatgcccaaaagatcgattcttgggaattcggtaatgagctcagtggaagtgga
attgcagccagtgtaaaccctactcaatatggacaggacttgattgaccttaagaaagtt
gtgactgagttatataacagctcctcaatgccacaaccaaagatcctagcccccggcggt
ttcttcgatcgagattggttcattaagcttcttgagagttccggctcgggagtcgtcgat
gtcttgacacaccacatctacaatcttggtgccggcaatgatcctattgtcccaaatagg
atggtggatccattttatttgagcgaaatagctgagacatataaaagcattcaactgacc
atacaagactttgggccatggtccgctgcttgggttggtgaggccggaggtgcatacaat
agcggtggtcccaatgtttccaatgcctttatagatagcttttggtatttggatcaactc
ggcatgacatcaagctacaaccataaagcatactgtagacaaagtctcgtcggtggcaat
tatggtctcctagacaccaccacatttgtgcccaaccctgacttttacagtgctttattg
tggcatcggttgatggggaaacgcgtccttggggttgaggttgacaatgcaccatacctg
cgcgcatatgctcattgtgccaagaacaaggctggtgtcatgcttctcttcatcaacttg
agcaactccacgaccttcaatgtgagtatggagaatgacatgaacatattcaccacttct
tcatcagacaaagtggccaaggacgtggtgtcccaaacaggctctaaaagagaggaatac
cacctaactccaaagaatggcaacatattcagtagagttatgttgttgaatggcagtcca
ttggagctcacaaaagctggagaaataccagcaataagccccctctccatcgattcggac
tcaccgatcttgatcgctccgaggtctattgcatttgttcggttgccggattttaaggct
ccggcttgcgcctag
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