Amborella trichopoda: 18427946
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Entry
18427946 CDS
T02990
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
atr
Amborella trichopoda
Pathway
atr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
18427946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18427946
03051 Proteasome [BR:
atr03051
]
18427946
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
18427946
Proteasome [BR:
atr03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
18427946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
18427946
NCBI-ProteinID:
XP_006837051
UniProt:
W1NYY6
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MGTERAAGGWSDIVKKGSGMRKQGEIDRVLEDCKSSKGISIAVIDANAMISGGEKLSNCA
EKFVSIKEALEEIRDPVSRHKISFLPFTVETMEPSEESLKKVVSFARTTGDLQTLSDVDL
KLIALSYTLEARIHGTAHLRDVPPPVHVVNVSRLPEKDMPGWGSNVPNLEEWEALEHAVE
GNLNENSRILPLKNLTLNVPPASECVCSEDNSPKITNEAQCESLEESGQGHRKHIRFPPK
KIVTIEGKKMVADGIDASKGEVDENDEWYPAVSRSTHRRYLRRKARREALGSCDHPEIEG
NMDEEVTLDDTNIVSKNAVLDNTKALQGASFEEPHLVNKSSSEAACAEIQNGQIGDGVLD
QEEDLDSMMGHDELLGEGCVDEVNNFEKDGDDVEVCTIGLDHLEIMSQFDGSESINASQV
EDSSSEQSWMLRSLSDSSVACVTSDYAMQNVLLQMGLRLLTPTGMQIRQLHRWVLKCHAC
NRVTAEIGRIFCPKCGNGGTLRKVAVTVGESGVVQAARRPRIILRGTKFSLPSPQGGRDA
ITKNPILREDQLPHKLLYPKLKKKPANKGLDILSSDDVIFHSADKRASLKPPVRKAVALF
SGKRNPNDNHFSRGKK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccgaaagagcagcgggtggatggagtgatatagtaaagaagggcagtggtatg
aggaagcaaggggagattgatagggttttggaggactgtaaatcaagtaaagggataagc
atcgctgttatcgatgctaatgctatgatttctggtggagaaaagctctctaattgtgca
gagaagtttgtttcaataaaggaggctttggaggagataagagaccctgtttctcgtcac
aagatttcatttttgcccttcactgtagaaactatggagccttccgaggaatcactgaaa
aaagttgtgagctttgcaaggacaactggagatttacagactctttctgatgtcgatcta
aaactcattgctttgtcatatactctggaagcccggattcatgggactgcacatcttaga
gatgttcctcctcctgtacatgtagtgaatgtttcacgattacctgagaaagacatgcct
gggtggggttcaaatgtgcctaatttggaggagtgggaagctcttgaacatgctgtagaa
ggcaacttgaatgagaattcaaggattttgccattaaaaaacttgactttgaatgtacca
cctgcaagtgaatgtgtttgttcagaagataattcaccaaaaatcaccaatgaagctcaa
tgtgagagtttagaggaatcaggtcaaggtcataggaagcatataagatttccccctaag
aagatcgttactattgaggggaagaagatggtagctgatggaattgatgcttctaaagga
gaagtggatgagaatgatgagtggtacccagctgtaagcaggagcacacataggaggtat
ctgagaagaaaagcgagacgtgaggccttgggaagttgtgatcatccagagatagaggga
aatatggatgaggaagttacactggatgacactaatattgtttcaaaaaatgctgtactt
gacaacactaaggctcttcagggtgcttcttttgaggaacctcatttggtgaacaaatct
tccagtgaagctgcttgtgctgagatacaaaatggacaaattggagatggcgttttagat
caggaggaagatttggattctatgatgggtcatgatgaattattaggtgaggggtgtgtt
gatgaggttaacaatttcgagaaagatggagatgatgttgaagtttgtactataggattg
gaccatcttgagataatgagtcaatttgatggcagtgaaagcattaatgcatctcaagtg
gaagatagtagcagtgagcaaagttggatgttgcgttctttgtccgactcaagtgtggca
tgtgtcacaagtgactatgcaatgcaaaatgttcttctccagatgggtcttcgtcttttg
actccgactgggatgcaaatacgtcagctccacaggtgggttttgaagtgtcatgcttgt
aatagagtgactgcagaaattggaaggatattttgcccaaaatgtggcaatggtgggact
ttacgcaaggttgctgttactgttggtgagagtggtgttgttcaagcagctcgacggcca
cgtattatactccgaggcacaaaattttcgcttccttcgcctcaaggtgggagggatgcc
ataactaagaatcctatattacgtgaagatcaacttccccacaagctcctttacccaaaa
ttgaagaagaaacccgcaaataaggggttggatattctgagttcagatgatgtaatattt
catagtgccgacaaaagagcttcattgaagcctcctgtgagaaaagccgtggcacttttc
agcggcaaacggaatcccaatgacaaccatttctcacgcggtaagaaataa
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