KEGG   Amborella trichopoda: 18428029
Entry
18428029          CDS       T02990                                 
Name
(RefSeq) histone deacetylase 5
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atr03036]
    18428029
Enzymes [BR:atr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     18428029
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     18428029
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 18428029
NCBI-ProteinID: XP_011621109
LinkDB
Position
Unknown
AA seq 683 aa
MNLQRAIAAPPVVGLVYDERMCKHSEPTVMPHPESSMRIRAIWDKLGQARVTERCVIVPA
KRAEDKDIACVHTMNHLKLIKSIDSLSAIPRSRIARRFNSIYLSEGSTEAAYLAAGSVLE
VAERVAKGELNSGVAIVRPPGHHAEPDEAMGFCLFNNIAIAAHCLVHERPELGIHKILIV
DWDVHHGNGTQKMFWSDSQVLFFSVHRFDSGTFYPSGDHGSHTMIGEGAGIGFNINVPWE
HGRCGDADYLAVWDHILIPIARSYDPDMILISGGFDAAIGDPLGGCCITPYGYSIMTKKL
MEFAKGKIVLALEGGYNLDSLENSVLACVETLLRQEKPTIKTPVSHPFRSTWSTIQMVRK
ILSPFWPVLSEELPQGLYANSRPYVFELSSSSDSDAEHKEEFTANSTEAPSGSVSDDFDI
LEPLGMLKIDVDGPKDRDALKSSLKREEIPCGPRPFPDQMVNVSVPWRPKYSEIDVWYAC
YGSNLDKSRFLCYVQGGQLDGMQIICRGAKDKSPPKEISWRMVPHRLFFAYAETKTWGPG
GSAFLRPKRNDCEKTHVCMYKITLEQFNDILLQENDNRGSDLTVPLVDLSALSFVESNES
TPLEVMKETRYGNLVCLGNVDGCPILTITCSLSDVEDFKSGKKPRQKPCKRYIDTLVVGL
TNGLGISEDEALAYIDYVASRPL
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgaatttgcagagagcaatagcagccccaccagttgtggggcttgtttatgatgagagg
atgtgtaagcactctgaacccactgtcatgcctcaccctgaaagctccatgagaattagg
gctatttgggacaagctagggcaagctcgtgtcactgaaagatgtgttattgttcctgcc
aagcgtgcggaggataaggatatagcatgtgttcataccatgaatcatcttaagttgata
aagagtatagattctctttcggctatacctagatctaggatcgcaagacgattcaattcg
atatatctcagtgagggctcaactgaagctgcttatcttgctgctggttcagttctagag
gtagctgagagggtggctaaaggggagttaaattctggtgtagccattgttaggcctcct
ggtcatcatgcggagcctgatgaagcgatggggttttgtctttttaataatattgccatc
gcagcgcattgccttgttcatgagaggccagaattgggaattcataaaattctaattgtt
gattgggatgtacaccatggaaatggtactcaaaaaatgttctggagtgattctcaggtg
ttgttcttctctgttcataggttcgactcagggaccttctatccatctggagaccatggc
tcccataccatgatcggtgaaggtgcaggtataggatttaacataaatgttccttgggag
catggaaggtgtggagatgcagactatcttgcagtttgggatcatatacttattcctata
gccaggagttatgatccagatatgattcttatttctggaggttttgatgcagctattggt
gatccattaggcggatgttgcatcacaccttatggttattcaattatgaccaaaaagctg
atggagtttgcaaaggggaagatcgtgttggcacttgaaggaggatacaatcttgattcc
ttggaaaattcggtccttgcatgtgtagaaacattattacgacaggaaaaacctactatc
aagactcctgtatcccatccatttagatcaacttggagcactatacaaatggtgcgtaaa
atactcagtccattctggcctgtcttgtcggaagaattaccacaagggttgtatgcgaat
agcagaccttatgtatttgagttgagttcaagttctgattctgatgctgagcacaaggaa
gagttcacagcaaattcgactgaagccccatctggttctgtttctgatgactttgatatt
ctggagcctcttggtatgctgaaaattgatgttgatggccctaaggatagggatgctttg
aagtcttcattaaagagggaggaaattccttgtggaccgaggccgttccctgatcaaatg
gttaatgtttctgttccttggagaccaaaatattcagagattgacgtctggtatgcttgc
tatggttcgaacttggacaaatcaaggtttctctgttatgttcagggtggacagttggat
ggcatgcaaatcatatgtaggggtgcgaaggataaaagtcccccaaaagaaatctcatgg
cgaatggttccccatcgtttattcttcgcatatgctgagacaaaaacatggggtcctgga
ggaagtgcgttcctacgtcccaaaaggaatgattgcgagaaaactcatgtatgcatgtat
aaaataacgcttgagcagtttaatgatatcttgcttcaagagaatgataataggggtagt
gacttgacggttcctttagttgatttatctgctctatcctttgtggaatctaatgaatca
actcctttggaggttatgaaggaaactcggtatggtaatcttgtttgcctcgggaatgtt
gatggctgccccattctgactataacgtgctccctctctgacgtggaggacttcaaatcc
ggcaagaagccgaggcaaaagccatgcaagaggtacattgacacattggtggtcggtctc
acaaatggtttggggatatcagaagatgaagcgctggcctacattgattatgttgcttca
aggccactataa

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