Amborella trichopoda: 18428049
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Entry
18428049 CDS
T02990
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18428049
Membrane trafficking [BR:
atr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
18428049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_2
bL31_N
TPR_12
Motif
Other DBs
NCBI-GeneID:
18428049
NCBI-ProteinID:
XP_006837151
UniProt:
W1NZ75
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MANYLAQFQAIKSSSNRLVVAVEDVSDLWPTVKDGFEARLPFKKACLNNKTRNPVYVENL
PVEFILTTDARLRSRFPQEQYLFWFREPYATAVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAHPSNDQATKSAKKIYAKLEVDFNSKKRERCCKLDIHGAETSVWEDIDSRI
IESIRNTLDRRVQFYEEEIRKLSEQRFMPVWNFCNFFILKESLAFMFEMAHLHEDSLREY
DELELCYLETVNTRGVKHKDFGGLDNGDDRAAFLNHAYKPLSQFVLDDTFREFEFRQYLF
ACQSKLLFKLNRPVEVASRGYSFIISYSKALSRHENKLPFCFREVWIISACLALINATVS
RYDGGLVTPDVEKEFFRLQGDLYSLSRVKFMRLAYLIGYGMDIEKSPANSAALSMLSWPR
PAVWPSVPPDASTRVAAKEKLLQSSPKAKHFGIQRKPLPLEPSSLLREANRRRASLSAGN
IFELFDGQHNLTPKDGPGADGSPMTPPPNKIPVSSMSRTNSGPVHFENSSLIRSPVDRPM
KLSEVHVAAEHALNATISDPDLLKALSSVHDFELKYLDLTKGAAENYNRSWWKRHGVVLD
GEIAAVCYRHGNYDLAAKSYEKVCALYAGEGWQNLLAEVLPNLAECQKILNDHAGYLASC
VKLLSLDKGLFLVQERQAFESEVVRLAHSEMKHPVPLDVSSLITFSGNPGPPLELCDGDP
GTLSVTVWSGFPDEISLESLTLTLIATFSADEGVKVIKSSSALVLKPGRNDVTLPLPPQR
PGSYVLGVLTGQIGNLRFRSHSYSRGGPPDSDDFMSFEKPIRPVLKVSKPRPLVDLSAAI
SSALLMNEAQWVGLIVRPIDYSLKGAILHIDTGPGLKIEESHMIEMESCNEAFEGFGQIR
NSNNISTDNSSTGGGGYERLPLIDGKLKLPDWASNLTSVLWLPVRAIDDRLLMGTSAVIS
QRQNIVDGMRTIALKLEFGVSHNQTFERTVAVHFTYPLYVSTRVSDKCKDGTLLLQVVLH
SQVKATLTICDAWMDLQGGFVHVGKDDGRPTPGFFPLSICPSSRAGIMFCIRLGSTTNGD
ESELLKSHSILNIRYRISGDRALGAHSPMVHDGQDASTGSRELLFKSAIVLQRPVLEPSL
AVGFLPLPSDGLRVGKLVSMRWRVERLKDIEGEAPSIHDGEVLYEVDANPENWMIAGRKR
GHVSLSLEQGSRIVISVICVPLVAGYVRPPQLGLPDVDVTNISCNPAGPHLICVLPPTLS
SSFCIPV
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggccaattacctagctcagtttcaggcgatcaagagctcttcaaaccgcctggtcgta
gcagttgaagatgttagtgatttgtggccaactgtcaaggatggatttgaggcacgattg
ccattcaaaaaagcttgtctcaataacaagactcggaatcctgtatatgttgaaaatcta
cccgttgagttcatattgacaactgatgctcgcctccgcagtcgctttccacaggaacaa
tatttgttttggttccgtgaaccctatgcaactgcagttcttgtcacttgtgaggatctt
gatgagttcaagacaattctaaaacctcgattgaaattgattgttcagaatgatgaacgt
gagtggtttatagtttttgtgtcaaaagcacatcctagcaatgatcaggccacgaagtca
gcaaagaaaatatatgccaagcttgaagttgattttaactccaaaaagagagaacggtgc
tgcaaactagatatacatggagcagaaacatctgtatgggaagatattgattccaggata
attgaatctatcagaaatactttggacagacgtgttcaattctatgaggaggagattcgt
aagctcagtgaacaacgtttcatgccagtgtggaatttttgtaacttctttattttgaag
gagagcttagctttcatgtttgagatggctcatctccatgaggactccttgcgagaatat
gatgagctagaactttgctatctagaaacagtgaatactcgaggagtaaaacataaggac
ttcggtggtttggacaatggtgatgatcgtgcagcttttctaaaccatgcatataaaccg
ttatctcagtttgtactggatgatacattcagagaatttgaatttagacaatatctcttt
gcctgccagtcaaagctattattcaagctaaatcgcccagtcgaggttgcatcaagggga
tactcattcataataagttactcgaaagcattgtcaaggcatgaaaacaaactacctttt
tgctttcgagaagtatggataataagtgcatgtttggctttaatcaatgcaactgtctct
cgctatgatgggggactggtgacgcctgatgttgaaaaagaattctttcgcctacagggt
gacctttattcccttagccgtgttaagttcatgcggcttgcatacctaataggatatgga
atggacattgagaaaagtcctgccaacagtgctgctttgagcatgctttcatggccaaga
ccagcagtctggccttcagttcctcctgatgcttcaacaagggtggctgcaaaagaaaag
ctgcttcaatcaagccccaaagccaagcattttggtattcagagaaaacctctacctctt
gagccatcctcacttcttcgagaggcaaaccggcgtagggcttctctttctgcaggaaac
atttttgaactattcgatggtcaacataacctgactcccaaggatggcccaggtgctgat
ggttctccaatgacgcctccaccaaacaaaatccctgtcagctctatgtctcgaactaat
tcaggacctgtacacttcgagaattctagtttgatccgttcacctgttgatcgtccaatg
aagctttcagaagttcatgttgctgcagaacatgcattaaatgcgacaatttctgatcct
gatctactgaaagccttatcatctgttcatgattttgagctaaagtatctggatttgaca
aaaggtgctgctgagaattacaatcgttcatggtggaaacgccatggagttgtccttgat
ggagagatcgcagcagtctgctataggcatggaaattatgatctcgctgcaaagtcatat
gaaaaagtttgtgctctttatgctggagagggatggcaaaatttattagcagaagtcctt
cctaatttagcagagtgtcagaagatactcaacgaccatgctggatatcttgcttcctgt
gtcaaattgttgtctttagacaaaggcttattccttgtccaagaacgtcaagcattcgaa
tcagaagttgtccgacttgctcatagtgaaatgaagcatccagtgcccttagatgtgtca
tcattaataacattctctggaaatcctggaccaccactggagttatgtgatggggaccct
ggaactctatcggtaacggtgtggagcggctttcctgacgagatttctcttgaatcgctg
actctcactcttatagctacattcagtgcagatgaaggtgtaaaggttataaagagctcc
agtgctctcgtattaaagccgggaaggaatgatgtcaccttgccactgcctcctcaacgt
ccaggatcgtatgtcctgggtgttctaacaggacagattggaaatttgagattcaggtcc
cacagctactcaagaggtggacctccagatagtgatgattttatgagctttgagaaaccc
atcagaccagtcctgaaagtgtccaagccaaggcctctagttgatctctcagcggccatt
tcgtctgcgttgctgatgaatgaagctcaatgggttggcttgattgtaagacctattgat
tactctcttaaaggagcaatcttacacatagatactggaccaggtttaaaaatcgaggag
tctcatatgattgagatggagagttgtaatgaggcatttgagggcttcggccagataaga
aactccaataatatctcaactgataattcttctactggtggtggaggatacgaacggtta
ccactcatagatggtaaattaaaattgccagattgggcaagtaatttgacatcagttctg
tggttaccagttcgtgctattgatgatagattgcttatgggaacttctgcagtcatttca
caaagacaaaatattgttgatggaatgaggactattgccctgaaacttgaatttggagtc
tcccacaatcagacatttgaaaggactgttgctgtacattttacttatcctttatatgta
agcacacgcgtatcagacaagtgcaaagatggtactttattgctgcaggtggtcctgcat
tcccaagtgaaggctacactgaccatctgcgatgcctggatggatctccaaggaggtttt
gttcatgttgggaaggatgatggccgaccaactcctggcttctttcctctctcaatttgt
ccatcttctagggcaggaatcatgttctgcatccgccttgggagcacaaccaatggggat
gagtctgagctattaaaatcacacagtatcttgaacattcgatacagaatatctggagat
cgagctcttggagctcattcccctatggttcatgatggacaagatgcaagtactggatct
agggaattgctatttaagagtgcaattgtcttgcaaaggccagtgcttgaaccttcttta
gctgtgggtttccttcccttgccatcagatggtctgagagtgggcaaactggtcagtatg
cgatggagagttgagagactgaaggacatcgaaggagaagcaccttcaatccatgatggt
gaagtgttgtatgaagttgatgcaaatccagagaattggatgatcgcgggaaggaaacgt
gggcatgtttcactgtctttggaacaaggttcccggatagttatttcagtcatatgtgtg
cccttggtggctggttatgtgcgtccccctcaacttgggctgcctgacgtggatgtcacc
aacataagctgcaatcctgcaggtccacacctgatttgtgtgttgcctccaaccctcagc
tcatcattttgcatcccagtgtga
DBGET
integrated database retrieval system
