Amborella trichopoda: 18428383
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Entry
18428383 CDS
T02990
Name
(RefSeq) RHOMBOID-like protein 1 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atr01002
]
18428383
Enzymes [BR:
atr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
18428383
Peptidases and inhibitors [BR:
atr01002
]
Serine peptidases
Family S54: Rhomboid family
18428383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
CcmH
Motif
Other DBs
NCBI-GeneID:
18428383
NCBI-ProteinID:
XP_011621250
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MGKHPALDLETAAVPPRTVAPPPAQPWHSWLVPLFTVANVSLFVLTMYLNDCPRNEPVGL
GGKMKEKSSCLFVRSLGRFAFQPLDENSFLGPSSTTLDFMGALDWKKVVFEHEWWRLFAC
IWLHAGVVHIVANMFSLLFIGVRLEEEFGFVRIGALYFLSGFGGSLLSCLSFQQNISVGA
SGALFGLLGAMLSELFTNWTIYANKCAALLTLMFIITINLAVGIDPHIDNSAHIGGFISG
FLLGFVLLIRPQFGWISRRYIPPGYDMGHVKPKYKMYQYILWVIAFIFLMMGYVGGLIKL
YSAHPLDN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcaccccgcgctcgacctcgaaactgcggcggtgccaccgcgcacggttgcg
ccgccgcccgctcagccttggcactcgtggcttgtgcccctctttacggtcgcgaatgta
tctctctttgtgctcaccatgtatttgaatgactgtcctcgcaatgaaccagtgggtctt
ggtgggaaaatgaaggaaaagtcctcctgcttgtttgttaggtcgcttgggaggttcgcg
ttccagccgctggacgagaactccttccttgggccgtcatccaccacgcttgactttatg
ggtgctctagattggaagaaagtggtttttgaacatgaatggtggcgcctttttgcctgc
atttggctgcatgctggagttgttcatatagttgctaatatgttcagcctcctatttatt
ggagttcgtcttgaagaagagtttggttttgtgagaattggagcactgtatttcctttct
ggctttggcgggagcttgttatcctgtctctctttccagcaaaatatatcagttggtgca
tctggtgctcttttcggattactaggggccatgctttctgagctctttacaaattggaca
atatatgcaaacaagtgtgcagcattattgactcttatgttcattattaccatcaatcta
gcagttggaatcgatccacatatagataactctgctcatattggaggattcatttcgggg
tttctacttggatttgttcttcttatacgacctcagtttgggtggatcagtcgtagatac
attcctcctggatatgacatggggcatgttaaaccgaagtacaaaatgtatcagtatatt
ttgtgggttattgctttcatcttcctgatgatgggctacgtcggtgggttgatcaagctt
tatagtgcacatccactggacaattga
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