Amborella trichopoda: 18428464
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Entry
18428464 CDS
T02990
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18428464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18428464
Spliceosome [BR:
atr03041
]
Common components
Common spliceosomal components
SR proteins
18428464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
18428464
NCBI-ProteinID:
XP_006837843
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MSGRAARTIFVGNLPGDIREWEVEDLFHKYGPIIDIELKIPPRPPAYCFVEFENARDAED
AIYGRDGYPFDGNRLRVELAHGGRGHSSSLDRRNSHASGNVGRLTGNSRHSEYRVIVRGL
PSSASWQDLKDHMRKAGDVSFAQVFRDDDGVTGLVDYTNYDDMKYAIRKLNDTEFKNPFS
RAYIRVRKYDRSLSRSCSRSRSRSRSHNRSSGAPRSHSRSLIKSKEPRSRSESRSVSPRS
RSMSVRISSRSRSRSRS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgtgctgctcgaacaatatttgttggcaacctgccaggggatatccgagaa
tgggaagtggaagatttattccacaagtatgggcccatcattgatattgagttgaagatt
ccacctcgccctccagcttactgttttgtagagttcgaaaatgctcgggatgctgaagat
gccatttatgggagggatggttatccttttgatggcaaccgtttacgggttgaacttgcc
catggtgggagaggacattcttcttcattggatcgtcgtaatagccatgccagtggaaat
gttggcagactaactggaaattccaggcattctgaatatcgagtcattgtgcgtggactg
ccctcttcagcatcatggcaagatctcaaggatcatatgagaaaggctggagatgtgtct
tttgctcaagtttttcgtgatgatgatggtgtgacaggactcgtagactacactaactat
gatgacatgaaatatgcaattcgaaaacttaatgatacggagtttaagaatccattctcc
cgggcttatattcgggtcagaaagtatgaccgtagtttgtccaggagctgtagccgaagc
agaagccgcagcaggagccacaataggagcagcggcgcaccgcggagtcatagccgtagc
cttatcaaatcaaaggaaccacgttcaagatctgaatcacgatcagtttcaccaagatcc
agatctatgtctgtcagaatctcttccaggtcaaggtccaggtccaggtcttga
DBGET
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