KEGG   Amborella trichopoda: 18428510
Entry
18428510          CDS       T02990                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
atr  Amborella trichopoda
Pathway
atr03082  ATP-dependent chromatin remodeling
atr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    18428510
   03083 Polycomb repressive complex
    18428510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atr03036]
    18428510
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     18428510
  Histone modification proteins
   HAT complexes
    HATB complex
     18428510
   HDAC complexes
    Sin3A-HDAC complex
     18428510
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     18428510
    PRC2.2
     18428510
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     18428510
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    18428510
  Chromatin remodeling factors
   NuRD complex
    18428510
   NuRF complex
    18428510
   NuRF complex (fruit fly)
    18428510
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_WDR75_1st Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 18428510
NCBI-ProteinID: XP_006837888
LinkDB
Position
Unknown
AA seq 370 aa
MAAKEDGSSTWEAEVEEEEEEEEEFKIWKKNSPLLYDMVLSHALDWPSLTVQWLPPNDHD
DDAVFPLILGTHTSCGEPNSLIIAQAHLPPKQTSTSLSIPKVLIEKEICHDGEVNRARYM
PQNSRIIATKTIHSDVFVFDYGKHPSRTPPGGSCSPDLRLRGHTMEGYGLSWNPHKEGYL
LSGSDDSLICLWDISTMPQQQVLEAKEVYDVHEGVVGDLSWHLKHEYLFGSVGEDCRLNI
WDLRSSLPKKPLQSILAHQAEVRICRGEVYEVAWNPKSETILASSGADRRVMVWDLDRIG
EEQAAEDAEDGPPELLFVHGGHTDKISDFSWNPHHDWVIASVAADNIIQIWQMADHITND
GEDVHADLYP
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggctgcgaaggaagatggatcatcgacgtgggaggcagaggtggaggaggaggaagag
gaggaggaggagttcaagatttggaagaagaacagccccctcctttacgacatggtcctc
tcccatgccctcgactggccctccctaaccgtgcaatggcttcctcccaatgaccatgac
gacgatgccgtcttccccctaatcctcggcacccacacctcctgcggcgagcccaactcc
ctcatcatcgcccaagctcacctccctccaaaacaaacctcaacctccctctccataccc
aaggttttgatagaaaaagaaatatgtcatgatggtgaagttaatcgggctcggtatatg
ccccaaaattctcgcattattgccaccaaaacaattcattctgatgtttttgtctttgac
tatggcaagcatccttctagaactcctcctgggggttcatgcagtcctgatttacgattg
agaggtcataccatggaaggatatgggttgtcttggaaccctcataaggagggttacctg
ttgagtggttctgatgattcccttatttgcttgtgggatatctctactatgccacagcag
caggtgcttgaggcgaaagaagtgtacgatgttcatgagggcgtggttggagatctttct
tggcacttaaagcatgaatatctatttggatctgtaggagaagattgtcggttaaacatc
tgggacttgcgctcttctctacccaaaaagcctctgcagtccattcttgcacatcaggct
gaggtaagaatatgcaggggagaagtgtatgaagtagcatggaatcctaagtctgaaacc
attttagcatcttctggtgccgacagacgtgtaatggtttgggatctggacaggattgga
gaggagcaggctgctgaagatgctgaagatggaccacctgaattgctatttgttcatgga
ggtcacacagacaagatatctgacttctcatggaatccccatcatgattgggtcattgca
agcgtagcggcagataacattattcagatatggcagatggctgaccatattactaatgat
ggtgaggatgtgcatgctgatttatatccctag

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