Amborella trichopoda: 18428872
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Entry
18428872 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: NF-kappa-B-activating protein
KO
K25931
NF-kappa-B-activating protein
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18428872
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
18428872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nkap_C
Motif
Other DBs
NCBI-GeneID:
18428872
NCBI-ProteinID:
XP_011621404
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Position
Unknown
AA seq
642 aa
AA seq
DB search
MGRSEYDESSEPYHKLRNGASRCETLGRKSYDRHSPKTLDRRSYGRDSSPETRAGGSYRR
ASLETQGMRSNGHHSSPDWNDRHQSLDDDRSPSPSHFRNSRSRHDGYGGRSNRYFLDRDK
GSRDGRVSDTDDEELKGLNYEEYRRIKRQQLRNRLLNCIWNVTPSPPRLDHGDDQENGVE
IAINEKDLQSGEKSRVNSGDGFSGSGRKASSDYKDRKKSIRDEFEESEGEPESDSDSDSE
ISKSPEMKRRERGGRRERRRSHIKSRNRNRPVSDESESESNSGSDDSEKRKKREIGGDRT
GSHRKGSNRKRRDSVTESEENEESESESGSGSXISSSPRTRRKKRDRRTHNRSGSHRKNE
TSRDSVSGSEKSDDLSGSEYSSDEKKKPKRKHSLKRNSRKGVVGRKSRRSRRDISSDESE
SSGERESDESDDARTGLKPSSHPNKPKKKKHSDSEANNSLDNGGNEAQKEKEEAPKKPEI
DNEALMFKEMIESQKKPNSSLENEPVVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQG
KRIPRRGEVGLSAEEIQKFEGLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYE
EKAKREHKVMSDLQRLVQRHIGQDVGPTHDPFSQKGSEVAEA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaagtgaatacgatgaatcttctgaaccctaccacaagctaagaaatggcgct
agccgatgcgaaaccctaggccggaaatcatacgaccgccattctcccaaaaccctagat
cggagatcctatggcagggattcttctcctgaaacccgagccggtggatcttatcggcgt
gcttcactagagacccaaggtatgagatccaacggccatcactcgtcgccggactggaat
gaccgacaccaaagccttgatgatgatcggagccctagccctagtcacttcaggaactca
aggtctcgacacgatggctatggaggaaggtctaataggtattttctcgatagggataag
ggttctcgagatggtagggtttctgatactgatgatgaagagttgaagggtttgaactat
gaagaatacagaaggataaagaggcaacaattgaggaaccgattgttgaattgtatatgg
aatgtcaccccaagtcctcctagattggatcatggcgatgatcaagaaaatggagttgaa
attgccataaatgagaaggatttgcaatctggtgagaaatctagggttaattctggagat
gggttctccggtagtggaaggaaagcttcctctgactataaagatcgaaaaaagagtatt
cgtgatgaatttgaggaatcagagggtgaaccagagtctgattctgattctgattcagag
ataagcaaatcacccgagatgaagagaagagaaaggggaggaagaagagagagacgtagg
tctcatattaagagcagaaatagaaaccgtccagtttcagatgaatcggagagtgaatca
aattctggttctgatgactcggagaagaggaagaagagggaaattggaggagatagaact
gggtctcatcgtaaggggagcaataggaagagaagagattcagtcacagagagcgaagag
aatgaggaatcagaaagtgaatctggttctggttcatagataagcagctcgcctagaaca
aggaggaagaaaagagatagaagaacacataatagaagtgggtctcataggaagaatgaa
acgagcagagattcggtctctggaagtgaaaaaagtgatgatttgagtggttcagagtac
tcttctgatgaaaagaaaaaacccaagagaaagcatagcctcaaaaggaattcgagaaaa
ggggtagtgggtagaaagtcaaggaggagtagaagggacatcagttctgatgaaagtgaa
agcagtggtgagagagaaagcgatgaatctgatgatgctaggacgggtttgaaaccatct
tcccaccctaacaaacccaagaaaaagaagcactcagattcagaggccaacaattcatta
gataatgggggcaatgaggcccaaaaggaaaaagaagaagcccccaaaaaaccagagatt
gataatgaagctctcatgttcaaggagatgatagagtcacaaaagaaacccaactcaagc
cttgaaaatgagcctgttgttgggcctatgcctctccctagagctgaaggccatatcagc
tatggaggtgccctacggcctggagaaggagatgccattgctcagtatgttcagcaaggg
aagcgtattcctaggagaggagaagtgggtctttcagctgaagagattcagaagtttgag
ggcttgggttatgtcatgagtgggagcaggcatcaaagaatgaatgcgattcgtataagg
aaagaaaaccaggtttacagtgctgaagataagcgagcgttggctatgttcaattacgag
gagaaggcgaagagagagcacaaggtgatgtcagatttgcagagactggttcagaggcac
attgggcaggatgttggcccgacgcatgacccattttctcagaaaggatcggaggttgct
gaagcataa
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