Amborella trichopoda: 18428916
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Entry
18428916 CDS
T02990
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18428916
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18428916
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atr04040
]
18428916
Protein phosphatases and associated proteins [BR:
atr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18428916
Membrane trafficking [BR:
atr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
18428916
Ion channels [BR:
atr04040
]
Chloride channels
Chloride channel (CLC)
18428916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
18428916
NCBI-ProteinID:
XP_011621417
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MYWNGIQNGLAAARHAWSRLPESESGTTDDRERDEFSSRQSTSDSVESLDYEIIENYAYR
EEQAQRGKLYLSYYVGVKWLFSLLIGIGTGLAAVFINLAVENFAGWKFAATLSINQHSYF
AGFIVYAFSNLALVFSSVFIVTHFAPAAAGSGIPEIKGYLNGIDTPGILLFRTLIGKIFG
SIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHISSRWLQVFKTDRDRRDLVTCGC
AAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRSAMGWCKNGNCGHF
GSGGFIIWDISGGQEDYSFKELLPMAVIGVIGGLLGALFNQLTLYIASWRRNHLHKKGTR
FKIIEVCLVSLITSAISFGLPLLRKCSPCPDSEANSSIECPRKPGMYGNYVNFYCVKDKE
YNDLATIFFNTQDDAIRNLFSAKTFHEYSAQSLLTFLVMFYSLAVVTYGTAVPAGQFVPG
IMIGSTYGRLVGMFVVNFYKKLNVEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLK
LLPLIMLVLLISKAVGDIFNEGFYEAQAHLRGIPLLESRPRQYMRKMTAKEACTNQKVVY
FPRIVKVADLVSVLRSNKHNGFPVIDHSRSGETLVIGLILRSQVLVLLQSKLDFQHNPLP
YDTRGSLPIRHTSSEFVKPVSSKGISIEDIHLSQEDLEMYIDLAPFLNPSPYLVPEDMSL
AKVYNLFRQLGLRHIFVVPRASRVIGLITRKDLLEEDREDSATMELQSTSVRDHHSSKRV
FGKSSMEQPLLDNLLTQE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtattggaacggtattcagaatgggctggcggcagccagacatgcctggtctcgattg
ccggaatccgagtcgggcactactgatgatagagaaagggatgaattttcttctcgccaa
tccaccagtgactcggtagagagtcttgactatgaaatcattgagaattatgcgtaccga
gaagaacaggcgcaaagagggaagctgtatcttagttattatgtgggggtgaagtggttg
ttttcccttctcattgggatcggcacaggactagctgcagtttttatcaatctagctgtt
gagaacttcgctggttggaagtttgcagcgacactttctataaatcaacattcatacttt
gcgggtttcattgtttatgcattctccaacctggctttggtcttttcttctgttttcatt
gtcacgcactttgcgccggctgctgcaggttctggtattcctgaaattaagggatactta
aatggtattgatacccctggaattcttcttttcagaacactaattgggaagatatttgga
agcattggttcggtgggaggtggtctggctcttggcaaagaaggtcctcttgtccacaca
ggggcttgtattgcttctctgcttggacaaggtggatccactaagtatcatattagctca
agatggcttcaagtgttcaagactgatcgagatcgccgtgatcttgtcacctgtgggtgc
gctgctggtgttgctgctgcttttagagctccggtcgggggggtattgtttgctctggag
gaggtcacatcttggtggaggagccaacttatgtggcgtgtcttctttacatctgctgta
gtagcagttgtggtgcgttctgctatgggctggtgtaaaaatgggaactgtggccatttt
ggctctggaggcttcataatctgggacatttccggtgggcaggaagactattcctttaag
gagttgttaccaatggctgttattggtgtaattggcggccttcttggggctctttttaat
cagcttacattatatatagcctcttggcgtcgaaatcatttacataagaaagggactcga
ttcaagattattgaagtatgcttggtatctttgattacatcagctatttcatttggtttg
ccattgttaaggaaatgtagtccctgccctgattctgaagctaattccagtattgagtgc
cctcgcaagccagggatgtatggaaattatgtaaatttttattgtgtcaaggataaggaa
tacaatgacctggctacaatttttttcaacactcaggatgatgccatacgcaatttattc
agtgcaaaaacttttcatgaatacagtgctcaaagtcttcttacatttttggttatgttt
tattctcttgcagtggtgacatatggaaccgctgtaccagcgggccagtttgttcctgga
ataatgatagggtcaacctatggacgccttgttggaatgtttgtggtcaacttttacaag
aagctcaatgttgaggaaggaacgtatgctcttcttggagcagcttcttttcttggtggt
tctatgcggatgacagtatccctttgcgttattatggttgagatcacaaataatctgaaa
cttttgccacttatcatgctagttcttctaatatcaaaggctgttggtgatattttcaat
gaagggttttatgaagcacaagctcatctaaggggtatcccattacttgagtccagacct
aggcagtacatgcgtaaaatgactgcaaaggaggcctgcacgaatcaaaaggttgtttat
ttccctcgtatcgtcaaagttgccgacttggtttctgtcctacgaagcaacaaacacaat
ggctttccagtgatagatcactcacggagtggagagacacttgtcattggactcattctt
cgtagtcaggtgttggtactccttcagtctaagttggattttcagcacaaccctttgcca
tatgatactagaggttctttaccgatcaggcatacatctagtgaatttgtgaaacctgtc
tccagtaaaggaatttccatagaagatattcatctcagtcaagaagacttggaaatgtat
atagatcttgccccgtttcttaacccctctccttatcttgttccagaagatatgtctttg
gcgaaggtatacaatcttttccgacaattaggattacggcatatttttgttgttccccgg
gcttctcgtgttattggattgatcacaaggaaagacttgttagaagaggacagagaagat
tcggctacaatggaactacagtcaaccagtgtaagggatcatcattccagtaaaagagtt
tttggaaaatcgagtatggagcagccgcttcttgataatcttctgacccaagaataa
DBGET
integrated database retrieval system
