KEGG   Amborella trichopoda: 18429152
Entry
18429152          CDS       T02990                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
atr  Amborella trichopoda
Pathway
atr03420  Nucleotide excision repair
atr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    18429152
   03460 Fanconi anemia pathway
    18429152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atr03032]
    18429152
   03400 DNA repair and recombination proteins [BR:atr03400]
    18429152
DNA replication proteins [BR:atr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    18429152
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     18429152
SSDB
Motif
Pfam: ERCC4 CCDC71L
Other DBs
NCBI-GeneID: 18429152
NCBI-ProteinID: XP_011621495
LinkDB
Position
Unknown
AA seq 592 aa
MVLEVVLEEPPKWKVLREVLEEVEEERQKQVLNEDTWDDESNTVLVACKDELSCMQLQDC
ISKGPQQVMREEWERYLLGKADLHGLKTRNKKKSQEPKGFGVLNGVIPARPGENAEASSI
SNLEQSALLAAAAEVKNVGEEEAVTREPQLHGGRGNRGRGRGRGRGSGGKTSGSKARLPK
SKDKGKQEKGNSTLMSESGNEDRAAGEGPVAMASSFTKMGGGASVENGNIGTKPLPVVQF
FAMDSDQKILDVFKPSVIIVYHPDMTFVREIEVYKAENPTRNLKVYFLFYEESTEVQKFE
ASIRRENGAFESLIRQKSLMMIPVDQDGRVVPNTPGEPQSLISQNALTRKAGGRKAIEKE
TQVIVDVREFMSSLPNVLHQKGMKIIPVTLEVGDYILSPLICVERKSIADLYSSFASGRL
YNQVETMVRYYRIPVVLIEFSQDKSFSFQSASEIGDDVSPNSIISKLCLLVLHFPRLRLV
WSRSLHATAEIFASLKANQDEPDESTAMRVGVPSEEGIVENDVRAENYNTSAVEFLRRLP
GVTDSNYRSIMDGCNSLAELAVLPLEKLAELMGGQRAARMLRDFLDAKCPNF
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggtgttggaagttgtattggaagagccacccaaatggaaggtgttgcgagaggtgttg
gaagaagttgaggaagaaaggcaaaagcaagttctgaatgaagatacttgggatgatgag
agtaatacagttttagttgcttgcaaagatgaactctcctgcatgcagcttcaggattgc
atctctaaaggtcctcaacaggttatgcgtgaagagtgggaaagatacttattgggcaag
gcagatttgcatgggctaaagacacggaacaaaaagaaatcccaagaacctaaaggtttt
ggtgtattgaatggggttatcccagctaggcctggagagaatgcagaagctagcagcata
agcaatcttgagcaatctgctcttttagcagcagcagctgaagttaaaaacgtgggtgag
gaggaagctgtaacgagggagcctcaattgcatggagggagaggaaatcgtggaagagga
agaggaagaggaagaggaagtggtggaaaaacctctggttcaaaagctcgacttcctaaa
agtaaagataaaggaaaacaagaaaaaggaaatagcactttaatgagtgaatcaggcaat
gaggatcgtgcggcaggtgagggaccagtggcgatggctagttctttcacaaagatggga
gggggtgcatccgtggaaaatggaaatattggtactaaaccacttccggtggtacaattt
tttgcgatggacagtgaccagaaaatacttgatgtattcaagccatcagtaattattgtt
taccacccagatatgacatttgtcagagagatagaagtttataaagcagagaatcccact
agaaacttgaaagtgtattttttattttacgaagagtctactgaagtgcagaagtttgag
gcaagtatacgaagagaaaatggagcatttgaatctcttatcaggcagaaatccttgatg
atgatacccgttgaccaggatggaagggttgtaccaaacactcctggtgagccgcaaagt
ttgatatctcagaatgcattgaccaggaaggctggtggtaggaaggcaattgagaaagaa
acgcaggtcatagtggacgtgagagaatttatgagcagccttcccaatgttctccaccag
aaaggaatgaaaattattcctgtcactcttgaggttggagattacattctttcgccactc
atctgcgttgagagaaagagcattgcagatctctattccagctttgcatctggtcgcctc
tacaatcaagtcgaaaccatggttcgttattacagaatacctgtcgtgctcattgagttt
tcacaggacaagagcttctctttccagtctgcaagtgagattggtgatgatgtctcccca
aatagcataatatcaaagctatgtctgcttgttctacattttcctcgccttcgccttgtc
tggtcccgaagcttacatgcaactgctgagatatttgcatccctcaaggctaatcaagat
gaacctgatgagagtacagctatgagggttggtgtcccctccgaggagggcattgtggaa
aatgacgtaagagctgagaattacaacacatcagctgtggagtttctaaggcgtctacct
ggtgttacggattctaactatagatccatcatggatggctgcaacagcttagctgagttg
gctgtgctccccctagaaaagctagctgaactcatgggaggacaaagggcagctcggatg
cttagggattttctcgatgccaagtgcccaaacttctaa

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