Amborella trichopoda: 18429189
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Entry
18429189 CDS
T02990
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
atr
Amborella trichopoda
Pathway
atr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18429189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18429189
03036 Chromosome and associated proteins [BR:
atr03036
]
18429189
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
18429189
Coactivators
SAGA/TFTC/STAGA complex
18429189
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
18429189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
18429189
NCBI-ProteinID:
XP_006838543
UniProt:
W1NU21
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MDPSIMKLLEDDEDEHLHSGADVEALTAALNRDIGGPQPGSQTSVSRGSLSHGNSQSSFP
LSGEWPQLAQEEPQVQQHQQPHEQQNSQLLQQQQSSDMECVMEHQPLQSHPPGEHEQMLV
DHKPPQPLQLNQNMEKKPNPSEEISYDHNSNAQVVRNPELDTYGPPENQQQHPHLVNVNV
QQEQAGTGQVNASMRQFKSPSSIPFGLLMPILCSQLDKDRAMQLMTAFNRLKKAEINKGD
FMRLIKGIVGEQTLKQAAQQLQQKHTQAIRNSANQQQFHLQQSQTPSQQSVPLSQGNTQL
LAEPQSIPKLTSNQHQKSYTPSEPQSHIPNPTLQMQTDSMLTNPELSAQKSRQTGERQHD
AQGTQSNQVSSVNMDRPDQEKDLSVVSIQQQQHMHIPHSPFSMYGHTMGNYHSQPFPMPS
ANVQASSGKTQPQDSQIGQVAHAQGMSSSQPVSLKNMPRYELHGARNETNRLQSGSVPQI
ASQSAPQQNQSPWQSSLEKEQMSSGMSSIAYVKPEPNEQASEHEQKPQLPITQNPSSFGA
VHHEQGRSFHGPSKDEPHEKQSARMNFASSSNISSSSQLQTSSATHPDHKMQVTQTPPVS
SATIRMPSTITPAAAVTNTKNTPKKPSVGQKKPFEALGNPTQQSSKKQKVAGEFADQSIE
QLNDVTAVSGVNLREEEEQLFSTPKEESRASEATRRVVQEEEERMILQKGPLQKKIVEIM
AKCKLKSTGNDVERCLSMCVEERMRGLISNLIRISKQRVDIEKPRHRSFTTSDVRRQILS
MNRRAKEDWEKKQAEEAEKLRKLNETEGSVGVDGEKDEARAKASKANKEEDDKMRTNAAN
VAARAAVGGDDMLSKWQLMAEQARQKREGGLDGSASGSSNKDTPRKPFTAIKRTVSGGGD
RQEAEHKGPSSSMPVARRPFGRAPAPIHPLKIMRRISVKDVIALLEREPQMSKSTLMYRL
YERMSMDGSNTPEKAGD
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggatccctccattatgaagcttttggaggatgatgaggatgagcacttgcattctgga
gcagatgtggaggctttaacagctgccttgaatagagacattgggggtcctcagcctggt
tctcagacttctgtttctagaggatcattatcccacggaaactctcaatcttcatttcca
ctatctggagaatggccacaacttgcccaagaagagcctcaggttcaacaacaccaacaa
ccccatgaacaacaaaacagtcagctactacaacagcaacaatcatctgatatggagtgt
gtgatggagcatcaaccacttcaatcccatcctcccggtgagcatgaacagatgttagtg
gaccataaaccaccccaaccactccagttgaaccaaaacatggagaaaaaaccaaaccct
tctgaagaaattagctatgatcataattccaatgcacaagtggttcgaaacccagaactg
gatacgtatggacctcctgaaaaccagcaacaacacccacatttagtaaatgttaacgtt
caacaagaacaggctggcacaggtcaagtgaatgcttctatgaggcagtttaaatcacct
tcttctataccatttggtctattgatgcctatattgtgttctcagcttgataaagatagg
gctatgcagctcatgacagcctttaataggttaaagaaagctgagattaacaaaggagat
tttatgagacttataaagggaattgtgggggagcagactcttaaacaggcagcccaacaa
ttgcagcagaagcatacacaagctataaggaactcagcaaatcaacaacaatttcacttg
caacagtcacaaaccccttcacaacagtctgttcctctttcccagggcaacactcaactc
ttggctgaaccccaatccataccgaagttaacatcaaaccaacatcagaagagctataca
ccttccgaaccccaatctcacattccaaatccaactttgcaaatgcaaactgattcaatg
ctcaccaatccagagctcagtgctcagaaatctagacaaacaggagaacgacagcatgat
gcacaaggaacacaatcaaatcaagtttcttcagtgaatatggatcgtcccgatcaagaa
aaagatctttctgttgtttcaattcagcaacaacaacatatgcatattcctcactctcca
ttttcaatgtatgggcacacaatgggtaattatcattcccaaccatttcctatgccatct
gctaatgttcaagcctcttctggtaagacccaacctcaggattcacagattgggcaagtt
gctcatgcccaaggtatgagttcatctcagccggtgagcctgaaaaatatgcctaggtat
gagttacatggtgctagaaatgaaactaatagactgcaaagtgggtcagttcctcaaatt
gcaagccagtcagcaccacaacagaatcagagtccatggcaatcttcactagagaaagag
caaatgagtagtggaatgtcatcaattgcttacgtgaagccggaacctaatgaacaggct
tctgagcatgaacagaagcctcaattgccaataacccagaacccatcttcatttggtgca
gtccatcatgagcaagggaggtcatttcatggtccttcaaaggatgagccacatgagaag
cagtcagctaggatgaattttgcttcttcctccaatatctcatcatcaagtcagcttcaa
acttcttcagcaacacaccctgaccataagatgcaggttacacaaacccctccagtttct
tctgccacgattcgtatgccctctacaatcacaccagctgcggctgtcactaatacaaag
aatactccaaagaaaccttcggttggtcagaaaaagccatttgaggctcttggaaatcca
acacaacaatcaagtaaaaagcagaaggtagctggtgaatttgcggatcagagcattgag
caactcaatgatgtaactgctgttagtggagtaaaccttagggaagaggaggaacagcta
ttttccacccctaaggaggaaagtagagcttcagaagcaacaagaagagtagtacaagag
gaagaagaaagaatgattttgcaaaagggcccacttcagaagaaaatagtggaaatcatg
gccaagtgtaaactgaagagtacaggcaatgatgtcgaacgttgcttgtcaatgtgtgtt
gaggaacgaatgcgtggattgataagcaatctgataagaatttcgaaacagagggtagac
attgagaagccaaggcacagaagtttcactacttcagacgttcggcgtcaaattctatct
atgaatcggagggctaaggaagattgggagaagaagcaagctgaagaagcagaaaaacta
cggaaacttaatgaaacagagggaagtgttggagtggatggagagaaggatgaagctcgt
gcaaaggcatcaaaggcaaacaaggaagaagatgacaagatgaggactaatgctgcaaat
gttgctgctcgagctgctgttgggggagatgacatgttatcaaagtggcaactcatggct
gagcaagctcgtcagaaacgtgaaggtgggcttgatgggtctgccagtggatcatcaaac
aaagacacaccccgcaagcctttcacagctatcaagaggactgtaagtggtggtggtgac
aggcaggaagctgaacacaaaggcccatcgtcttctatgcctgtggctaggaggccattc
gggagggcaccggctccaattcatcctctgaagatcatgcgtagaatctctgtgaaggat
gtgattgcattacttgagagagagcctcaaatgtcaaaatccaccttgatgtaccgctta
tatgagaggatgagcatggatggtagtaacacaccagagaaagcaggtgactga
DBGET
integrated database retrieval system
