Amborella trichopoda: 18429238
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Entry
18429238 CDS
T02990
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atr01002
]
18429238
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18429238
Enzymes [BR:
atr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
18429238
Peptidases and inhibitors [BR:
atr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
18429238
Ubiquitin system [BR:
atr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
18429238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF7351
Motif
Other DBs
NCBI-GeneID:
18429238
NCBI-ProteinID:
XP_011621708
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MAIFSLISMGETSPQKSSSWGEESPFNSPHAQLSDSRSSLSDPRKPASTANVAQGSSGSL
SSSPLMEPRGCSPLQGKPSSCSSHLFPFKKPASMADNDHQESPGSPSSVTEPSYLIPMEG
KPSASASPVASGERPAPMEHDALEESSAPPSRSSLTKRDPMALNVLQERPCSSFYSFMDY
RPPSPMGAGLVNLGNTCFMNAVMQCITHTAPLLLSLQTCSHVCPGESDGFCALCYLREHV
DWCLSRSGGCVHPRYLVENLNKICSSFEVFQQEDAHEFLHCFLDKLHECVKPPNASLSRQ
SDSFVTQIFGGHIRSRVRCHNCGHCSDTYESSLGLSLEIDEAETLYAALKSFTKVETIDD
PEVKFGCDGCKQQVSVEKQLALDQAPAVATFHLKRFQNDGSNVEKVCKFVEYPLELDLQP
FICSSQSDTDDFLYDLYAVLVHSGNSYNYGHYFCFICSSPDSWHRLDDTQVRRSNAKYVL
NQEAYILFYKRRGVPWFSNLMETQRKCEEINHSSSSPKSVLEESKVSPPRPEECSSSGSD
TDVATTSISIPACPMAPHPLIPSMQSKHKEDHAKDHANQDFCHAPMIPRSVNLKVGMTPM
PTSQPKESSSTPESLPKESLPITQSRSKESLLTPGPRPNESPVISTSVKKLLDKMPMGRR
SGLTRCLMDSEPRSDGALMNSKKRKVSSSSPPWKLTDLTLEERNMESGVSYPGLSPRSLR
RACSKAKAIDTGTILDFECELTR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcttctcgttaatttctatgggggagacttcccctcaaaaatcctcatcttgg
ggagaagaatcaccttttaattctccccatgcgcaattatccgattctaggtcttctctt
tctgatcccaggaaaccagcttcaacggcaaatgtcgctcaaggatcgtcaggttctctc
tcgtcttcccctttaatggaaccacgaggttgcagtcctctccaaggaaaaccctcttct
tgttcttctcatctatttccttttaagaagccagcttcaatggcggataacgaccatcaa
gaatcacctggttctccttcctcagtcacggaaccatcatatttgatacctatggaagga
aaaccctcagcttctgcttctcctgttgcttctggtgaaagaccagctcccatggagcac
gatgccctggaagaatcctctgctccgccttcacgctcatcattgacgaaacgagacccc
atggcgctcaatgtcctccaagaacgaccttgttcttctttttattctttcatggattac
aggcctccatctccaatgggtgcaggactagttaatcttggcaacacatgcttcatgaac
gctgttatgcaatgcatcactcatactgcgcctcttcttctgagccttcaaacatgcagt
catgtttgcccaggtgaatcggatggtttctgtgctttatgttatcttcgtgagcatgtt
gattggtgtttatccagatctggtgggtgcgtccacccccgctatctggtggagaacttg
aataaaatttgttcgtcgttcgaagtttttcagcaagaagatgctcatgagttcttacac
tgctttctggacaaactccatgaatgcgtcaagcctccaaacgcttccttgtctaggcag
agtgacagcttcgtgactcagatttttggaggccatataagaagccgggtaagatgccac
aattgtggccattgttcagatacttatgagagttcgcttggtctgagtttggagatagac
gaagctgaaaccctatatgctgctctgaagtcattcacaaaggtagaaactattgatgat
cctgaggttaagtttggttgtgatggttgtaagcagcaagtatcggtggagaagcagctg
gcactggaccaagcccctgctgttgctacatttcacctgaagagattccagaacgatggt
tcgaatgtggagaaggtttgcaagtttgtggagtacccattagaactggatttgcagccg
ttcatttgcagctcacaaagtgacactgatgattttctatatgatttgtatgcggttctt
gtccattctggcaattcatacaattatggtcattacttctgctttatttgttcttcacca
gactcttggcacagattggatgatacacaggtgaggagatcaaatgctaaatatgtactc
aaccaagaggcatatatattattctacaagaggcggggtgtaccctggttttcaaattta
atggagactcaaagaaagtgtgaggaaatcaatcactcctcaagctctccgaagtcagtg
cttgaagagtcaaaagtgtcacctccaaggccagaagaatgtagcagctccggtagtgat
actgatgttgccactaccagcataagcatccctgcctgccccatggcaccccatcctttg
attcccagtatgcaatccaaacacaaagaagaccatgcaaaagatcatgccaaccaagac
ttctgccatgctccaatgataccacgaagtgtcaatttgaaagtggggatgaccccaatg
cccacttctcaaccaaaagaaagctcatcaacgcctgagtctctaccaaaagaaagctta
ccaataacccagtctcgatcaaaagagagcttactgacccctggccctcgaccgaatgag
agcccagtgattagtacatcagtgaagaagctcttggataaaatgcctatgggacgaagg
tcaggattaactagatgcttaatggatagtgagcctcgcagtgatggtgctctcatgaac
agtaaaaagcgaaaggtaagctcaagctctccaccttggaagttgaccgatttgaccctt
gaggagaggaatatggagagtggcgtatcatatccaggcttaagcccgcgctcgctgagg
cgagcatgctccaaggccaaggccattgacactggcacaattctcgactttgaatgtgaa
ctcacaaggtga
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integrated database retrieval system
