KEGG   Amborella trichopoda: 18429353
Entry
18429353          CDS       T02990                                 
Name
(RefSeq) WD repeat-containing protein 13 isoform X1
  KO
K24739  WD repeat-containing protein 13
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:atr04990]
    18429353
Domain-containing proteins not elsewhere classified [BR:atr04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   18429353
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_Aladin WD40_Gbeta Beta-prop_EML EIF3I Beta-prop_IFT122_1st WD40_RFWD3 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EMC1_N Beta-prop_WDR41 Methyltransf_35 WD40_like Beta-prop_SPT8 Menin
Other DBs
NCBI-GeneID: 18429353
NCBI-ProteinID: XP_006838702
UniProt: W1P147
LinkDB
Position
Unknown
AA seq 611 aa
MGENLEVTQMETQPQNLQGLEIQSQNYEESEIQPKISEENDSQHKNFDARETQIQKPKER
ETQHRSSNWGDAQYQNSEEREIQIPNSTERENNHLDSNGSETQIENSSARETQIRNFEER
EGLPQKTEERETQHQSSKDEETQHQKSKGTGEMDAEFFSCLLQPIISNVDPSYVAMRRLL
LSRKVASGCDQRKDWKCNGRGYVAFRNYIQQRKNGESLHVPSQPSTPGQSGRWGSSPGLQ
SILYEAESLGSSRDLQGFNSALSHCTSFSSTLSESDRPLRFAEPAYSFVGMHCIFDNCKA
SVTILKFGHMSSDTLAYGASDGSLTVCTVSQPPAIIQQLKGHSKDVTDFAFSSNNQYIAS
ASMDKTVRIWEISKGLCIRVIYGVSPQLCICFHPVNNNFLTVGTANKEITVINFSTGRVV
NKAVFGNAITAMDNDHTGQLIFAGDAQGFIYSISMNSHTGALSKTHRNRNNTRTSPITTV
QYRTFSLLARGPVLLACSQDGSLFFFSVALEIQGYLTLRCSLKLAPRVHNIHASFCPLLS
LEKGEFVVSGSEDSNVYFYDLTRPKHICVNKLQGHGSPVIGIAWNHGENLLASSDSDGTV
IVWKREKVGSR
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgggggagaatttagaggtgactcaaatggaaacccaaccacaaaacttacaggggtta
gaaatccaatcccaaaactatgaggagagtgaaatccaacccaaaatctccgaggagaat
gattcccagcacaaaaacttcgatgcgagggaaacccaaatccaaaagccgaaggagaga
gaaacccaacaccgcagctccaattggggagacgcccaatatcaaaactcagaggagaga
gaaatccaaatcccaaactccactgagagagaaaacaaccacctagactccaatgggagt
gaaacccaaatcgaaaactccagtgcgagagaaacacaaatccgaaacttcgaggagaga
gaaggactgccgcaaaagactgaggagagagaaacccaacaccaaagctccaaggatgaa
gaaactcaacaccaaaaatcaaagggaactggggagatggatgctgaattctttagttgt
ctccttcaacctatcatttccaatgttgatccttcttatgtggccatgcgtcgcctactc
ctttccagaaaggttgcttctggttgtgatcaacgcaaggattggaaatgtaatggcaga
ggttatgtggcctttcgcaactacattcagcaacgaaaaaatggggaaagtttgcatgta
ccaagccaaccaagtactcctggtcaaagtgggcgctggggatcatctcctggtctgcag
tctatcctttatgaggcggaaagtttgggctctagcagggatttgcaaggctttaattct
gctcttagccattgtacaagttttagctccactttgagtgaatctgatcgccctcttcgc
tttgcggaacctgcatattcttttgtagggatgcattgtatctttgacaattgcaaagca
tcagttactatattgaaatttgggcacatgagctcagacactcttgcatatggcgcttct
gatggtagcttgactgtttgcactgtttcacaacctcctgccataattcaacaattgaag
ggccactcaaaagatgtcacagattttgctttttcatccaacaatcagtacatagcttcg
gcatcaatggataaaacagttagaatttgggagatatcaaaagggctttgtattagagta
atatatggagtttctccacaattatgcatttgtttccacccggtcaacaataacttcctt
acagtgggaacagcaaacaaagaaatcactgtgatcaattttagtacaggacgagtagta
aacaaggctgtctttgggaatgcgattactgcaatggacaatgaccatactggtcagctt
atttttgctggtgatgctcagggttttatatattctatcagtatgaactcacatacaggt
gcattatcaaagacccatcgaaatcgtaacaacacgcgcacttctcccattaccactgtg
caatatcgtaccttttcactgttggcacggggtcctgttcttcttgcttgtagtcaagat
ggcagtctctttttcttcagcgttgctttagaaatacagggttacttaaccctgcggtgc
tcactcaaattggctcctcgggtacacaatatacatgcttccttttgtccattgctttcc
ctagagaaaggagagtttgtagtctctgggagtgaggactcgaatgtatacttctatgac
ctgactcgtccaaagcacatatgtgtgaacaagctgcagggacatggttctccagtcata
ggtatagcttggaatcatggggagaatctgttagcctcctctgattcagatgggaccgta
attgtttggaagagagagaaagttggtagtagataa

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