Amborella trichopoda: 18429507
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Entry
18429507 CDS
T02990
Name
(RefSeq) protein argonaute 1A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18429507
03036 Chromosome and associated proteins [BR:
atr03036
]
18429507
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18429507
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18429507
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
18429507
microRNA pathway
RISC loading complex
18429507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF3284
Motif
Other DBs
NCBI-GeneID:
18429507
NCBI-ProteinID:
XP_006838856
UniProt:
W1P392
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MPRKSRKANQPQDANKPEGDAPPSSQSSAQSSSGAPPPASSRRPQATAPLPSGSSSRPQS
TAPLPSTSSSRPQAMAPPPFPEMMQSLSISSNAPPSSSKALVPPRRPPRPATAGTRCLVN
TNHFLIQLHNKELFHYDVAITPEVQSRGKNRVIIRELIRLYKDSNLGKRLPAYDGRKSLY
AAGSFPFTSKDFVVKLSDEAGSSSLPSREKEYKVTIRFAASFDLHHLQQFLQGMQMDCPQ
EAIQALDVVLRELPSRNYTPVGRSFFSSKFGKEEIGDGLECWRGFYQSIRPTQMGLSLNT
DVSTTAFYEPVPVISFVSKLFNKDPPKQFSDAEKVKVKKALRGVKIEVTHTPAKRRYRVS
GITRESTNQLAFSIEEQGTRTTVVQYFRDKYNYHLRYANWPALEVGNDRKKTYMPMEVCK
IVEGQRYTKKLNEKQVTAILRASCQRPREREQKCIDMIRNSRFSEDPFAREFGIRVSDSI
TTVDARVLPPPRLKYHDSGKEKDCTPRVGQWNMINKKMVNPGAVPTWVCINFSRVNFNAV
QGFCQDLVTMCRNMGMDFNPRPFLPIENARPDQVEKLLMFVHQKTAGTHLTLLIVILPEV
TGSSYGQLKCICETQHGIVSQCCKPRNVTKPNRQQYLENVALKINVKVGGRNSVLVDALT
RRIPMVSDVPTIIFGADVTHPPPGEDSSPSISAVVASQDWPEVTKYMGLVSAQSHRREII
ADLYTCQRHPTKGLVHGGMIRDLLISFKIATRQKPQRIIFYRDGVSEGQFNQVLLEEMDA
IRKACASLEEGYLPPVTFIVCQKRHHTRLFTNNHNNQSSVDRSGNILPGTVVDTKICHPS
EFDFYLCSHAGIQGTSRPAHYHVLYDENSFSADGLQSLTNNLCYTYARCTRSVSIVPPAY
YAHLAAFRARYYLEASLSEDGSSAGGLNRQAGDVAIRPPLPAIKENVKQVMFFC
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaaaatccagaaaagcaaaccaacctcaagacgcaaataaaccagaaggtgat
gctccaccttcttctcaaagctctgctcagtcatcgagcggagctcctcctcctgcttct
tcgagacggccacaggccactgcgcctcttccttctggatcttcttcgagaccacagtcc
actgcgcctcttccttctacgtcttcttcaaggccacaggctatggcacctcctcccttc
cctgagatgatgcagagtctctcaatttcatcaaatgcgcctccttcttccagtaaggcg
ctggtccctccaaggagaccaccgcgtcctgcaactgctgggactcggtgtctcgtaaat
actaaccattttcttattcagctccataacaaagagctcttccactacgatgtggctatt
actcctgaggttcaatccaggggaaagaacagggtcattatcagggagctcattcgactg
tacaaggattccaatctagggaaaaggctaccagcatatgatgggaggaagagtttgtat
gcggcaggctcctttcccttcacttccaaggattttgtggttaaactttctgatgaagca
ggatccagcagcttgccaagccgagagaaagagtacaaagtaacgattcgatttgctgca
agctttgatctacatcatctacagcagttccttcaaggaatgcaaatggattgtcctcaa
gaggcaatacaggcccttgatgtggttctccgagaacttcctagtagaaattacacgcct
gttggccggtcattcttttcgtcaaaatttggaaaagaagaaattggtgatggcttagaa
tgctggagaggattttatcaaagcattcgacccacacagatgggtctgtcccttaatact
gacgtatctacaaccgcattttatgaaccagttcctgtaataagttttgtttcaaaactt
tttaacaaggatccacccaaacagttttctgatgctgagaaagtgaaggtgaaaaaggct
cttagaggtgttaagattgaggtcactcatacccctgcaaaaaggagatatcgcgtttct
ggtataaccagggagtcgacaaaccagttagctttttccattgaggagcaaggtacaagg
acaactgtagttcagtattttagggataaatacaactatcatcttcggtatgctaactgg
ccagctttagaagtcggtaatgaccgcaagaagacatacatgcctatggaggtgtgtaag
attgtcgagggacaacggtatacgaaaaagttgaatgaaaagcaggtgacagccatactg
agagcttcttgtcaacgacctcgtgaacgtgagcagaaatgcatagacatgattagaaac
agcagattcagtgaggacccttttgctcgtgaatttggtattagagtcagcgatagtatc
actactgttgatgcgcgtgttttaccccctccgaggttgaagtatcatgactctgggaag
gagaaagattgcactccacgtgtgggccagtggaatatgataaataagaaaatggttaat
cctggtgctgttccgacttgggtttgcataaacttttcaagagttaacttcaatgcggtt
caaggtttttgtcaggaccttgttactatgtgcagaaacatgggcatggatttcaatcca
aggccgtttcttcctatagaaaatgctcgtccagatcaggttgagaagctattaatgttt
gtgcatcaaaaaacagcaggaactcatcttactttgctgattgttatcttaccggaagta
actggatcatcatatggtcagttgaaatgcatatgtgagacacagcatggcattgtctcg
caatgttgcaagccaagaaatgtcaccaaacctaacaggcaacagtatcttgagaatgtg
gctttgaaaatcaatgtaaaggtgggtggtaggaattcagtgcttgttgatgcattaaca
cgcagaattcctatggtatcggacgtgcccactataatatttggtgcagatgtcacccat
cctccaccaggggaggactcaagtccttccatttcagctgttgtagcttctcaggattgg
cctgaggtaaccaaatacatgggccttgtttccgcccaatcacatcgaagggagataata
gctgatctgtatacttgtcagcgacacccaacaaagggacttgtacacggcggtatgatt
cgggatcttctgatttcattcaaaatagcaacaagacaaaagcctcagcggatcatcttc
tacagagatggagttagtgagggccagttcaatcaagtcttgcttgaggaaatggacgca
atccgtaaggcctgtgcttcattggaggagggctatctgcctcctgtgacttttattgtc
tgtcaaaagcgacatcacacccgattgttcacaaataatcacaacaaccagagttcggtg
gatagaagtggaaatattctacctggtacggtggtggatacaaaaatttgccacccctca
gagtttgatttctatctgtgcagtcatgctggcatacagggtactagtaggcctgctcac
tatcatgtgctctatgatgagaacagcttcagtgctgatggccttcaaagcctaaccaac
aatttgtgttatacatatgctcgttgcacccgctcggtctcaatagttcccccggcatac
tatgcacaccttgccgcctttcgagcacggtattatttggaggcctctctctcagaggat
gggtcatctgcaggtgggcttaacagacaggcaggggatgttgctataaggcctcctcta
cctgccattaaagaaaatgtgaagcaggtgatgttcttttgttga
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