KEGG   Amborella trichopoda: 18429696
Entry
18429696          CDS       T02990                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
atr  Amborella trichopoda
Pathway
atr00040  Pentose and glucuronate interconversions
atr01100  Metabolic pathways
Module
atr_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:atr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    18429696
Enzymes [BR:atr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     18429696
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Glyco_hydro_49
Other DBs
NCBI-GeneID: 18429696
NCBI-ProteinID: XP_006839042
UniProt: W1P214
LinkDB
Position
Unknown
AA seq 384 aa
MEMKYILLIIISLLFTLGSADINVTQFGTKADGKSDDSGAFTKAWKSACNSDDSTTLYVP
VGNYLLYPTIFGGPCKSPKITINLEGNLIASTDINKVDDGSWLRFENIDGLEINGGVLDG
KGAPYWHCKEDDGDCPVGARSLVIKNCKNVRMNNLTSMSSKKFHIALDNSKGINLHGIKI
RAPGNSPNTDGIHVDGSSDVLIRDASIQTGDDCISISPGTHDLHVEQVTCGPGHGISIGS
LAHSLDEPGVQNVTVKNVVFHGTTNGLRIKSFARKSNGFVKNIVYDGVVMNNVENPIIID
QKYCPHGHCPNQKSGIKISDVMYKNITGSSTTKVAINFNCNASNPCNNIELQDVDLTYKG
KKAQASCTNANGKATGVVTPPSCL
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggagatgaagtacatcttgcttatcattatctccctcctcttcactctcggtagtgcc
gacatcaatgttacacagtttggaacgaaggctgatggaaaatctgatgacagcggtgcc
tttacaaaggcatggaaatcggcttgcaactccgacgactcgactaccctttatgttcca
gtcggaaactatctgctctatccgaccatctttggtggaccatgcaaaagtccaaaaata
accataaatttggaaggaaatttgattgcttctactgatattaacaaagtagatgatgga
tcatggcttaggtttgagaatattgacgggttagagatcaatggtggagtactagatggg
aagggagccccctattggcattgcaaagaagatgatggagattgccctgtgggtgcaaga
tctctagttatcaaaaattgcaaaaatgtaagaatgaacaacctcacatcaatgagcagc
aaaaagtttcacattgctcttgataactctaaggggatcaatcttcatggcataaagatt
agagcccctggtaatagtcctaatactgatggtattcacgttgatggatcaagtgatgtc
ctcataagagatgcaagcatacaaactggagatgattgtatttcaatttcaccaggaaca
cacgacttgcatgttgagcaagtgacttgtgggcctggacatggcatcagcattgggagc
cttgcacatagtttggatgaaccaggcgtgcagaatgtgacagtgaaaaatgtagtgttt
catgggacaacaaatgggttgaggataaagtcttttgcacgaaagagtaatggttttgtg
aaaaatatagtatatgatggagtggtcatgaacaatgtggagaaccccatcatcatcgac
caaaaatactgcccacatggacattgtccaaatcagaaatccggcataaagataagtgat
gtgatgtacaaaaacattaccggaagttctacaactaaggtggccattaactttaattgc
aacgcaagcaatccatgcaataacattgaattgcaagatgtggatcttacttacaaagga
aaaaaggcccaggcctcttgcacgaatgctaatgggaaagcaactggtgtagtcacacca
ccaagttgtttatag

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