Amborella trichopoda: 18429696
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Entry
18429696 CDS
T02990
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
atr
Amborella trichopoda
Pathway
atr00040
Pentose and glucuronate interconversions
atr01100
Metabolic pathways
Module
atr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18429696
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
18429696
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Glyco_hydro_49
Motif
Other DBs
NCBI-GeneID:
18429696
NCBI-ProteinID:
XP_006839042
UniProt:
W1P214
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MEMKYILLIIISLLFTLGSADINVTQFGTKADGKSDDSGAFTKAWKSACNSDDSTTLYVP
VGNYLLYPTIFGGPCKSPKITINLEGNLIASTDINKVDDGSWLRFENIDGLEINGGVLDG
KGAPYWHCKEDDGDCPVGARSLVIKNCKNVRMNNLTSMSSKKFHIALDNSKGINLHGIKI
RAPGNSPNTDGIHVDGSSDVLIRDASIQTGDDCISISPGTHDLHVEQVTCGPGHGISIGS
LAHSLDEPGVQNVTVKNVVFHGTTNGLRIKSFARKSNGFVKNIVYDGVVMNNVENPIIID
QKYCPHGHCPNQKSGIKISDVMYKNITGSSTTKVAINFNCNASNPCNNIELQDVDLTYKG
KKAQASCTNANGKATGVVTPPSCL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaagtacatcttgcttatcattatctccctcctcttcactctcggtagtgcc
gacatcaatgttacacagtttggaacgaaggctgatggaaaatctgatgacagcggtgcc
tttacaaaggcatggaaatcggcttgcaactccgacgactcgactaccctttatgttcca
gtcggaaactatctgctctatccgaccatctttggtggaccatgcaaaagtccaaaaata
accataaatttggaaggaaatttgattgcttctactgatattaacaaagtagatgatgga
tcatggcttaggtttgagaatattgacgggttagagatcaatggtggagtactagatggg
aagggagccccctattggcattgcaaagaagatgatggagattgccctgtgggtgcaaga
tctctagttatcaaaaattgcaaaaatgtaagaatgaacaacctcacatcaatgagcagc
aaaaagtttcacattgctcttgataactctaaggggatcaatcttcatggcataaagatt
agagcccctggtaatagtcctaatactgatggtattcacgttgatggatcaagtgatgtc
ctcataagagatgcaagcatacaaactggagatgattgtatttcaatttcaccaggaaca
cacgacttgcatgttgagcaagtgacttgtgggcctggacatggcatcagcattgggagc
cttgcacatagtttggatgaaccaggcgtgcagaatgtgacagtgaaaaatgtagtgttt
catgggacaacaaatgggttgaggataaagtcttttgcacgaaagagtaatggttttgtg
aaaaatatagtatatgatggagtggtcatgaacaatgtggagaaccccatcatcatcgac
caaaaatactgcccacatggacattgtccaaatcagaaatccggcataaagataagtgat
gtgatgtacaaaaacattaccggaagttctacaactaaggtggccattaactttaattgc
aacgcaagcaatccatgcaataacattgaattgcaagatgtggatcttacttacaaagga
aaaaaggcccaggcctcttgcacgaatgctaatgggaaagcaactggtgtagtcacacca
ccaagttgtttatag
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