Amborella trichopoda: 18429744
Help
Entry
18429744 CDS
T02990
Name
(RefSeq) tRNase Z TRZ2, chloroplastic isoform X2
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18429744
Enzymes [BR:
atr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
18429744
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
18429744
Prokaryotic type
18429744
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
18429744
NCBI-ProteinID:
XP_006839090
UniProt:
W1P229
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MFSPSPVSCSYLPFPAIHHEPAKTEQFSPRKFGRDYADSGQNGTGPSLLAMRRSGFLSAV
NSAIEEEEYRKARAEVNRKGVEVENVLIEGVSVGGHETCVVVPSMNVAFDIGRCPAKAVH
QDFLFITHAHLDHIGGLPMYVATRGLYGLKPPTVVVPPCIKEDVEKLFEIHRIMSRDQLK
LDLVALDVGETYEIRNDLVVRPFRTYHVIPSQGYVVYSVRNKLKKQYLHLKGHQIKNLKF
SGVEITDTILSPEVAFTGDTMSDFILEPRNSDALRSKILITEATFLDEVMSVEHAREHGH
THLFELIEQAKWFRNKAIVLTHFSSRYKLEDIREAASKLQSKASAKVVALTEGFKSMYT
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgttctccccttctcccgtttcgtgctcctatctcccatttccggccatccaccacgaa
ccagcaaagactgaacaattttccccgcgaaagtttggccgggattatgcagattccggc
caaaatggcactggtccatcattgctagccatgagacgttcgggttttctctctgctgta
aactctgcaatagaagaggaagagtacaggaaagctagggcagaggttaataggaaggga
gtggaggttgagaatgttctgatagaaggagtttcagttggtggccatgaaacctgtgta
gtggttcctagcatgaatgtggcttttgatattggaaggtgccctgctaaagctgtgcac
caagattttctctttatcactcatgctcaccttgatcacattggtgggcttccgatgtat
gttgcaactcgtggtctttacggcttaaaaccacctacagtcgttgtacctccatgtatt
aaggaagacgtagagaagctttttgagattcataggattatgagtcgggaccaactcaaa
cttgatttggttgcattagatgtgggcgaaacgtacgaaataagaaatgatcttgttgta
aggccattcagaacatatcatgtcatacccagccaggggtatgttgtctactcagtgagg
aataagctaaagaagcaatatcttcacttgaaagggcatcagatcaagaatttgaaattt
tctggcgtcgagatcacagataccatactgtctccagaggtggctttcacaggtgataca
atgtctgattttatacttgagccacgcaattcagatgcccttagatcaaagattctcata
actgaggccacttttcttgatgaggtgatgagcgttgagcatgctcgagaacatggccat
acccatttgtttgaactcatagaacaggcgaaatggtttaggaataaggcgattgtgctc
acacatttctcgtctcgctacaaattagaggacatccgtgaagctgcatcgaagctgcaa
agtaaggcttctgcgaaggtggttgctcttacagaaggcttcaaatcaatgtatacctaa
DBGET
integrated database retrieval system
