Amborella trichopoda: 18429837
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Entry
18429837 CDS
T02990
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18429837
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18429837
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18429837
03019 Messenger RNA biogenesis [BR:
atr03019
]
18429837
03041 Spliceosome [BR:
atr03041
]
18429837
Enzymes [BR:
atr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
18429837
Protein phosphatases and associated proteins [BR:
atr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
18429837
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
18429837
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
18429837
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18429837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
18429837
NCBI-ProteinID:
XP_006839175
UniProt:
W1P294
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MEQGELDDIIRRLLDAKNSRTPKQVQLTESEIRKLCMTSKEIFIGQPNLLELEAPIKICG
DIHGQYTDLLRLFEYGGFPPAANYLFLGDYVDRGKHSIETICLLLAYKIKFPENFFLLRG
NHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDMNSL
DQVRNIARPVDVPDQGLLCDLLWADPDKEIEGWGENDRGVSYTFGADKVAEFLNKHDLDL
ICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPTEKKG
KMGFSNNTSKPGTPPRKGGKG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggggaactggacgacataatccgacggcttctggacgcgaagaacagcagg
actcctaagcaggttcagctcaccgagtctgagattaggaagctatgcatgacttctaag
gagatcttcatcggtcaaccgaatctcttagaattggaggcacctatcaagatttgtggt
gatatccatggtcagtatactgaccttctccgattgtttgagtatggtggttttcctcct
gcagcaaactatctatttctgggtgattatgtagaccgtggtaaacacagcatagagacc
atatgcttactcctggcttacaaaatcaaattcccagaaaacttcttccttttgagaggg
aaccatgagtgtgcttcaattaatcgaatctacggcttctatgacgagtgcaagcggcga
ttcaatgttcgcctctggaagatattcactgattgcttcaactgccttcctgtggctgca
ctcattgacgagaagatcctctgcatgcatggaggactttcaccagacatgaatagcttg
gatcaggttcgcaacattgctcgccctgttgacgtgcctgaccagggcctcctttgtgat
ttgctttgggctgatcctgacaaagaaattgagggctggggtgaaaatgacagaggtgtt
tcgtacacatttggggctgacaaggttgccgagttcttgaacaagcatgaccttgatctc
atctgccgtgcccaccaggttgtggaagatgggtatgagttttttgcaaagaggcagctt
gtgaccatattttcggcacctaactattgtggggagtttgacaatgcgggtgctatgatg
agtgttgatgagagtttgatgtgctcatttcaaatcctaaagccaaccgagaaaaaggga
aagatgggatttagtaacaacacatcaaaaccagggacgccaccacgaaagggtggcaag
ggatga
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integrated database retrieval system
