Amborella trichopoda: 18429947
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Entry
18429947 CDS
T02990
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
atr
Amborella trichopoda
Pathway
atr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18429947
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atr01007
]
18429947
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18429947
Enzymes [BR:
atr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
18429947
Amino acid related enzymes [BR:
atr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
18429947
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
18429947
Prokaryotic type
Other AARSs
18429947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Imm5
tRNA_anti_2
Motif
Other DBs
NCBI-GeneID:
18429947
NCBI-ProteinID:
XP_020520346
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MEAFKAWRLSSFKRFICSATLTSSSAFIKFSSSASPSSGSSSSIRVSDRRRSASTSTSDR
DAVRVIRLKKVEDLRAQGYEPYAYKWDRTHTTNQLQKLYHHLENGQEVNNEEDQVSVAGR
IVARRAFGKLAFLTLRDDSGTIQLYCEKEKLQDYQFEQLKTVLDIGDILGVSGSVKRTEK
GELSVYVKFFSVLTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRARAKIVSE
IRRTMEALEFVELETPVLQGAAGGAEARPFITYHNSLGRDLYLRIATELHLKRMLVGGFE
KVFEIGRIFRNEGLSTRHNPEFTTIEIYEAYTDYESMMNLAEEIVTRCSLVVNGKLRVVY
QGTEISLERPWRRETMHNLVKEATGIDFSEMGDDVNAAKAAAITALGLASDNKDKFAIET
CSSVGHVLNEVFETVVEPTLVQPTFVLDYPVEISPLAKPHRRIVGLTERFELFICGRELA
NAFSELTDPVDQRRRLEMQVKQHNEKRAAHSATGDGKERSNDDEAYEVTLDEDFVTALEY
GMPPAAGMGLGIDRLVMLLTDSASIRDVIAFPILKLQQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatttaaggcctggagattatcttcattcaagcgttttatttgctctgcaact
ttaacttcttcttctgcattcattaagttttcttcttctgcttctccttcttctggttct
tcctcttcaataagggtttctgatcgaagaaggtctgcctccacttccacctctgataga
gatgcggttcgcgtcattcgtcttaaaaaggtggaggacctgagagcgcagggctatgag
ccctatgcatataagtgggataggacccatacaaccaatcagttgcaaaagttatatcat
catctagagaatggtcaagaggtgaacaatgaagaggatcaagtatctgtagcaggaagg
attgttgcacggagagcttttggtaaacttgcttttctgactttaagagatgactctggt
acaattcagctgtactgtgagaaggagaaacttcaagactaccaatttgagcagttaaag
acagttcttgatattggggacatacttggtgttagtggttcagtaaagaggacagagaaa
ggggaactttctgtttatgttaagttcttttcggtccttacaaaatcactactcccgtta
ccagacaagtatcatggtcttactgatgtggataagcgttatcgccaacgatatgttgac
atgattgcaaatcctgaggttgcagatgttttccgagcaagagcaaagattgtgtcagag
attcgaagaacaatggaagctttggaatttgttgaactcgagactcctgttttgcaggga
gctgcaggtggtgcagaagctaggccatttattacttaccacaattcacttggacgagac
ctttatttgaggattgcaacggagcttcacctaaaacgaatgctggttggggggtttgaa
aaagtttttgagataggtcgaatatttagaaacgaaggcttatccactcgacataatcct
gagttcaccacaattgagatttatgaagcatatacagactatgaaagcatgatgaacttg
gcggaggaaattgtcactcgatgttctttggtagtgaatgggaagcttagagtggtctat
caggggacagaaatatctctggaaagaccttggagaagagaaactatgcataatctggtc
aaggaagccaccggaattgatttcagtgagatgggtgatgatgttaatgctgctaaagca
gctgcaataacagcacttggacttgcttctgacaacaaagacaagtttgcaattgagaca
tgttcatctgtaggccatgtcctcaatgaggtttttgagacagttgtggagcctacactg
gttcagccaacatttgtgctagattaccctgtagaaatatcacctttagctaaaccacac
agaaggattgtgggtttgactgaacgatttgaattgttcatttgtggtcgtgaattagca
aatgctttctcagaattaacggaccccgtggatcagaggagacgcttggagatgcaagta
aaacaacataatgaaaagagagcagcccactcagcaactggggatggaaaagaaagaagc
aatgatgatgaggcatatgaagttactttggatgaagacttcgtaacagctttggagtat
gggatgccacccgctgcaggaatgggactggggatcgacaggcttgtgatgcttctcacg
gattctgcaagtattcgagatgtcattgctttccccattctcaagcttcagcaataa
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