Amborella trichopoda: 18429962
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Entry
18429962 CDS
T02990
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
atr
Amborella trichopoda
Pathway
atr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
18429962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18429962
Enzymes [BR:
atr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
18429962
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
18429962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
HIRAN
Motif
Other DBs
NCBI-GeneID:
18429962
NCBI-ProteinID:
XP_020520347
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MLAGRASLVTLIGKRRRISATDQKDSLNSRKGDIVSPSDSLSPSAPQGKEQSLDLAMYLS
KSHNASDNGASQYLLDWVSCPVCGRNICGTDFLVNSHLETRMVILFADLCLANGTKRKMT
QRTLLQFNFYSSSKSNIHVDDTSSSKNLVVPLALDEKVQSSNFTKCAKDLDDQDGRSGME
SNASFLLSNSKTCLEYSVQSLIETQSVHCNETGSLSPLSSLPCPEQQFPLLEGTDVGTSM
ATLDTYIVGRRFCDDVDLKEGTCVSFVRDPENVKDHNAIKVLCSKSGSDHVLGFLPRDLA
LYLSPLMKNHHVMIEGLVTSLPDHSLGAVPVRIFCQKILVATERESDEHQMFQCLWENVA
RVVESSKDFPPNTKKYQQNFCILIKEVLKHHSYLFTDDEKLFLGSFESLSDDSQRLFIRL
YRRKGPWFRISNVYYPEISDHQLALKGLLAAGYMNRLEYSNEPLENIVKEMLDMLTVSEC
RELSSQACLKRNVRVVRREELVKGLLSAYADGTCSLLPTMVAERIGACVRISALAEFLLW
RVQRLFFLNGKQDLSAFLLVDLGLVRYPTYTCSISSNLFTSRSDLLAYEEAMDLAQIMDQ
SLDENNVEIVMRCIEVSEGRISNLPKERISQSFTQKSGGMFLSQFTASWVYSKVLTLGVS
VFERDRRYTNAIMLLRKLLNLIAQDGRRGYWTLRLSIDLEHLGHLNESLLVAEGGLTDPW
VRAGSRMALQRRVLRLGKPPRRWKTPSFAKSIKRKIKEVYIMGRPLNCEIGSKNRFYGDD
DEQCGVEELALQYYKAEGWEGAHSESGVWMTIFGLLMWDVIFADIPDVFRTRFQTAPLDL
CTDSFYPARMALIESHLRKVKHGMAKDILTTTWESNVGTSCQGVNWERHTVTDLQDIVTC
VGGPCLASICRLLAQDYKSWSSGMPDLLLWRLSSDGKSDDAKLVEVKGPKDRLSEQQQAW
LLMLMDCGFDSEVCKVRPTPFQD
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaggcagggcgagcctcgttacgctcatcggaaagcggaggaggatctccgcc
accgatcaaaaggattcattaaactccagaaaaggggacattgtgagtccatcggacagt
ttgagtccatctgcaccacaggggaaagagcaatccttggatcttgcaatgtatctatca
aaaagccacaatgcttctgataatggtgcttctcaatatcttttggattgggtttcatgt
cctgtttgtgggagaaacatatgtggaacagattttttggttaattctcatctagaaact
cgcatggtaatattgtttgcagatctatgtctagccaatggaaccaaacggaaaatgacc
cagcgaacattgcttcagttcaatttttattcgagttcaaaatcaaatatacatgtggat
gacactagttcttccaaaaatctcgttgtaccattggcattggatgaaaaagtccagtca
agtaacttcactaagtgtgccaaggaccttgacgaccaagatggaagatctggaatggaa
tccaatgcaagctttttgttgtccaattcaaaaacttgtcttgaatattcagttcagagc
cttatagagacgcaatctgttcactgtaatgagacaggctctttgagtcccttgtcatcc
ctcccctgccctgaacaacaatttccccttctggagggcactgatgttgggacttccatg
gctacacttgatacttacattgttggacgaaggttttgtgatgatgttgacttgaaggaa
ggaacctgtgtatcttttgtgagggaccctgaaaatgttaaggatcataatgccatcaag
gtgctttgtagcaaatctggaagcgaccatgtgcttgggtttctccccagagacttggct
ctatatctatctcctctcatgaaaaaccatcatgtgatgattgagggattggttacatct
cttcctgatcattcacttggcgctgttcctgtaagaatcttttgtcaaaagattctagtc
gctacagaaagagagtctgatgagcatcaaatgttccaatgcttgtgggagaatgttgct
cgtgttgttgaatcatcaaaagacttccccccaaacactaaaaagtatcagcaaaacttc
tgcattttgattaaggaagttttgaagcatcactcttaccttttcactgatgatgagaag
ctgtttctaggatccttcgagtcactttctgatgatagtcagaggcttttcattagactt
tatagacgaaaagggccatggtttcggatatcaaatgtctactacccagagatttcagat
catcaactagcgcttaaaggactgcttgcggctggttatatgaatcgtttggagtattca
aatgaacctttagagaacattgtaaaggagatgttggacatgcttactgtttcagagtgc
agagaactatccagtcaggcatgtttgaagagaaatgtccgggtggttaggcgtgaagaa
cttgtcaaagggcttctttctgcctatgctgatggaacgtgctcgctgcttcctaccatg
gttgccgaacggattggagcctgcgttcgaatttctgccttggctgagttcctcctttgg
cgtgtccagaggctattcttcctaaatggaaagcaagatttgtctgcctttctcttagta
gatcttggactagtgagatatcccacatatacctgcagtatatccagcaatcttttcaca
agtcgaagtgatttattagcatatgaagaggctatggacttagcacaaataatggaccaa
tcccttgatgagaacaacgtggaaattgtgatgaggtgcatagaggtatcagagggccgc
atttccaatctccccaaagaaaggatttctcaatcttttactcagaaatctggtgggatg
ttcttgtcacaatttacggcttcatgggtctactcaaaagttctcaccttaggtgtctct
gtttttgagcgtgaccgcaggtatacaaatgcaataatgcttcttaggaagctgctaaat
ttgatcgcacaggatggaaggcgagggtattggacccttagattgtctattgatttggag
cacctaggtcatctgaacgagagtctcttggttgcagagggaggcctaactgatccatgg
gttcgtgctgggtctagaatggcccttcaaagacgagttttacgcctgggaaaaccacca
aggcggtggaaaactcctagttttgcaaagtctatcaaaaggaagatcaaagaggtttac
ataatggggaggcctttgaactgtgaaatagggtcgaaaaataggttttatggtgatgat
gatgagcagtgtggagtagaggagttagctttgcaatattataaagcagaaggttgggaa
ggtgcgcactcggagagtggtgtttggatgacaatatttgggcttctaatgtgggatgtc
atctttgctgatattcctgatgtctttcggaccaggtttcagacagccccattagacctt
tgcaccgatagtttttatcctgcaagaatggcgcttatagaaagccatctaagaaaggta
aaacatggcatggcgaaggacatccttacaactacatgggaatctaatgttggcacctcg
tgccaaggtgtgaattgggagagacataccgtaacagatctccaggatattgtaacatgt
gttggaggtccatgcttggcctctatttgtcggctgttggctcaagattacaagagttgg
tcaagtggaatgcctgatctcttgctttggcgtctttctagtgatggaaagagtgatgat
gcaaagcttgtcgaagtcaaaggaccaaaagatcgcctctctgagcagcagcaagcatgg
ctgctcatgcttatggattgtggttttgactcagaggtctgcaaagtcaggccaacaccc
ttccaggattaa
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