Amborella trichopoda: 18430115
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Entry
18430115 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18430115 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18430115
Enzymes [BR:
atr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
18430115
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
18430115
Prokaryotic type
18430115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
18430115
NCBI-ProteinID:
XP_020520543
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MCSFRFPSTIFGCSSGNGIFLPGGAEEPNSSAKLPLPCHKWRLLISYDGTKFSGWQYQRW
PPTIQCAIEKALMVATKLERHELCLVGASRTDTGVHAWGQVAQFVTPFSYDNLENLHAAV
NGLLPSEIRVREISAARPEFHARFSSESKVYCYKIYNNPVMDPFQSLYAYHVPHRLNVTV
MREAAKNFVGKHDFTSFSNHSRGDRVVNPVKEIFQFKVIEMGALLQLEVEGSGFLYRQVR
NMVALLLQIGREALPADIVPAILACRDRKALAKVTLITPPHGLCLMFIKYNKELLQPPLG
APPTSFGRLRQVSKWTLIPPLTQLMALLNTPLTTSQTAANGRVPYFSNLCTALSLSLSSP
STLVGVLLLIYCRWRRCHAQIEISRRNKICSLTLL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcctttcggtttccttccaccatttttggatgttcctctgggaatggcatcttc
cttccgggtggtgcagaggagcctaatagcagcgcaaaactccctttgccttgccacaaa
tggcgccttcttatttcttacgatggcaccaaattttcaggatggcaatatcagcggtgg
ccaccaactatccagtgtgccatcgaaaaggctctgatggtggccacaaagctagaaagg
catgaactttgtttggtgggtgcaagccggactgatacaggtgttcatgcttgggggcag
gtggcacagtttgtaacacctttctcctatgataaccttgaaaatctacatgcagcagta
aatggtctgcttccatcagaaatcagggtgagggagatcagtgcggcaaggcctgaattt
catgctcgtttctcctcagagagcaaggtttattgctacaagatatacaacaatccagtc
atggaccctttccagagtctctatgcataccatgtccctcacaggctcaatgttacagtc
atgagagaagctgcaaagaattttgttgggaagcacgacttcacttctttctcaaatcat
tcacgtggtgatagagtggtgaatcctgtgaaagaaattttccaatttaaagtcatagag
atgggtgctcttttgcaacttgaggttgagggttcagggttcttatacagacaagtcagg
aacatggtcgcactgctgcttcaaattggaagggaagcacttcctgctgatattgtgcct
gcgatattagcctgtagggatcgtaaagcacttgcaaaagtaactttaattaccccaccc
catggactctgtctcatgtttatcaagtacaataaagaacttctccaacctccactaggt
gcccctcctactagttttggtcggcttcgtcaagtgagtaaatggacactcattccccct
ctgacccaactaatggcattgctaaatactcctctcacaacctctcagactgctgccaat
ggcagagtcccatactttagtaatctctgtacagcgctctctctctctctctcctccccc
tctacattggtaggggtgctgctacttatatattgtagatggaggcgctgtcatgcacag
attgaaatctctcgcaggaacaagatctgcagcctcacgttgctttga
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