KEGG   Amborella trichopoda: 18430165
Entry
18430165          CDS       T02990                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
atr  Amborella trichopoda
Pathway
atr03082  ATP-dependent chromatin remodeling
atr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    18430165
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    18430165
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:atr01009]
    18430165
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atr03021]
    18430165
   03036 Chromosome and associated proteins [BR:atr03036]
    18430165
Protein phosphatases and associated proteins [BR:atr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     18430165
Transcription machinery [BR:atr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     18430165
    SWI/SNF complex
     18430165
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    18430165
   PBAF complex
    18430165
   SWI/SNF complex
    18430165
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 18430165
NCBI-ProteinID: XP_006840388
UniProt: W1P2B9
LinkDB
Position
Unknown
AA seq 260 aa
MRSVPTGAKVPTKFRLPTSENLIPIRIDIEIDGQRYKDAFTWNPSDPDPEVLVFAKRTAR
EMKLPPTFITQIAQSMQSQITEFRSYEGQEMNTVEKLLPIKLDLRVNKTIIRDQFLWDVS
NFESDPEEFARNLCRDLDIEDPEVGPAIAVAIREQLYEIAVQNVASARETRISKKGRRER
GTEHALASKMGGTALDLMKLLGSKTSVVRRRREWDLYEPVVDILSNEEVEALEVREERNA
RMKKMLDEKDDGYMIRYTRM
NT seq 783 nt   +upstreamnt  +downstreamnt
atgaggtccgtaccaacaggcgccaaggttcccacaaaatttagattgccaacatcagag
aatctaattcctatacgaattgacattgaaatcgatggacagcgttataaagatgctttt
acttggaatccttctgatccggacccagaagtgctggtctttgcaaagcggacagcaagg
gaaatgaagctccctccaacattcataacacaaattgcacaatcaatgcaatcacagata
acagaatttcggtcctatgaaggacaagagatgaatacagttgagaagctgttgcccatc
aagctggaccttcgtgtaaataaaacaatcataagagatcaatttctatgggatgtaagc
aattttgagagtgatcctgaggagtttgctaggaacctctgcagggacttggacattgaa
gatcctgaagttggacctgccattgcagtagccatcagggagcaactttatgagattgca
gtccaaaatgtagcttctgcaagggaaacccgtattagcaagaagggtcggcgtgaacgg
ggtacagaacatgcactggctagtaaaatgggtggtactgctctggatttaatgaagcta
cttgggagcaaaacaagtgttgtcaggagaaggagggagtgggatttgtatgagcctgtc
gttgatattctgtcaaatgaggaagttgaagcccttgaagtcagagaagaacgaaatgct
cgcatgaagaaaatgcttgatgagaaagatgatggttacatgatacgctacacccgtatg
tag

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