Amborella trichopoda: 18430441
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Entry
18430441 CDS
T02990
Name
(RefSeq) auxin response factor 5 isoform X3
KO
K14486
auxin response factor
Organism
atr
Amborella trichopoda
Pathway
atr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18430441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
18430441
NCBI-ProteinID:
XP_006840655
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MEHYFIFLLFLCTGTRKTIDSVIWHACAGPLVSLPRVGSLVYYFPQGHSEQVAVSTQRIS
TSHFTNYLGLSSQLSCQVCDVTLHADKDTDEVYAQMTLQPVKSEMDLFSVPDFGQKQSKH
PSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDFTMQPPAQEIVARDLHDNLWTFRHI
YRGQPKRHLLTTGWSLFVGAKRLKADVSVLFIRDEKSHLCLGVRREMRQQTILSSSVLSV
DSMHIGVLAAASQAATYHSPFTVFYNPRASPSEFVVPLAKVHKAVYGRHTSIGMRFGMMF
ETEESGKRRYMGTITGICDIDAIQWPNSKWHNLQVEWDEPEAGDRQNRVSVWEIEIADCP
FLLCPLTMSGLKRPYQADLISSAEETEGSSMVKRSSSWFRETDISGLQNPVNLNMNIEHL
MKMLRKPRSAPMAQLGSQELGNIEDLILHTPCFQSITGFLKSSGPQFGLNKPDASILSSL
ISSDTSIHVPEIGNTVDKLQFPCNSSADFVDATQYIESLSQELFGLADLPNVKNACQTEQ
NALESQQNELESQLSRRGLISLLVGTTIPSTVNSCGLGDFSEESNEQSETYSNIQFEGSN
GSILIDSSISSSGLEGFGTLRAPSEGLLGGISSSLDLQSQVTSTSGVDNQSLSILGMPVN
SGATSSSNVEINENSFFPRNSWRQVTPQMRTYTKVQKLGSVGRSIDVTQFKNYEELTFAI
ACMFGLKGKLEDPRTSSWKLVYVDYENDVLLVGDDPWEEFVACVKCIRILSPSEVQQMSQ
EGLQLLNNSAKLATGSGDHVWDRP
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaacattattttatatttttgcttttcttgtgtacagggactagaaagaccattgat
tctgtaatttggcatgcttgcgccggaccacttgtttctttacctcgagttggaagtctt
gtttactacttccctcaaggacacagtgaacaggtcgctgtatcaacacaaaggatttcc
acgtcgcattttacaaactatctgggtctctcctcacagctatcgtgtcaagtttgtgat
gtcacattacatgcagacaaagatacagatgaggtatatgcacaaatgactcttcagcca
gtgaaaagtgaaatggatttattttctgtgccagattttggacaaaagcaaagtaagcat
ccatcagagttcttctgtaagactttgacagcaagtgatacaagcactcatggtggtttc
tcagtgcctcgtagggctgccgagaaactatttcctccactggatttcaccatgcagcca
ccagcacaggagattgtggctagagatttacatgataacttgtggacattccggcacatt
tacaggggacagccaaaacgtcaccttctaactactggttggagtttgtttgttggtgca
aaaaggctcaaggctgatgtttctgttttgttcatcagggatgaaaaatcacatctttgc
ttgggtgttcggcgtgaaatgcgtcaacaaacaatattgtcatcttctgttctatctgtt
gatagcatgcacattggagttcttgctgctgcttcccaagctgctacatatcatagccca
ttcactgtcttctataaccccagagcaagcccttctgagtttgttgttccattagccaaa
gtgcacaaagctgtatatggcagacatacttccattggaatgagatttggcatgatgttt
gaaacggaggagtcaggtaaacgcagatacatgggtactataactggtatttgtgatatt
gatgctattcagtggccaaattcaaagtggcataaccttcaggtagaatgggatgaacct
gaggctggtgacaggcaaaatagggttagtgtttgggaaattgaaattgcagattgtccc
tttctcttatgtcccctgaccatgtcaggtcttaagcgaccatatcaagctgacttgatt
tcttcagcagaagaaacagaagggagtagcatggtgaaaagatcttcgtcctggttccga
gaaactgacatttctggtctccagaaccctgtaaatctcaacatgaatatagaacacctc
atgaagatgcttcgcaaaccacgaagtgcaccaatggcacaattggggtcacaagaactt
ggcaacattgaggacttgattttgcacactccctgctttcaatctatcactggcttctta
aaatcatcagggccccaatttggattaaataagcctgatgcttccatcttatcttcattg
atcagttcagatacttctattcatgtccctgaaataggtaatactgtagacaagttacag
ttcccatgtaactcgagtgccgactttgttgatgctacccaatatatcgaatctttaagt
caagagttatttggtcttgccgatctccctaatgtgaaaaatgcatgccaaacagagcaa
aatgcattggaaagtcaacaaaatgaattagagagtcaattatctagaagaggtctgatt
tctctgctagttggcaccacaatcccaagcactgtgaattcttgtggacttggggatttt
tcagaggaaagcaatgagcaaagtgagacatacagtaatattcaatttgaaggtagtaat
ggcagcattttgattgattcttctatttcaagctcgggtttagaaggctttggcacctta
agggctccttcagaaggcttattgggtggtataagctcaagtttagatcttcaatctcag
gtcacttcaacaagtggagtagacaatcagtccttatctatactagggatgccggtcaat
tcaggagcgacatcttcaagcaatgtggaaattaatgagaatagtttctttccaagaaac
tcgtggcgacaggttactcctcaaatgagaacatacaccaaggtccaaaagttgggatct
gttggaaggtctattgatgtcactcagttcaaaaactatgaggagttgacatttgcaatc
gcgtgtatgtttggactcaaaggaaaacttgaagaccccaggacttcgagctggaagctt
gtgtatgtggattatgagaatgatgttcttctagttggagatgatccatgggaggagttt
gttgcgtgtgttaaatgcatcaggattttatccccatcagaagtccagcagatgagccaa
gagggactccaactccttaataattctgcgaagctggctactggatcaggagaccatgtt
tgggatcgcccttga
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