Amborella trichopoda: 18430769
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Entry
18430769 CDS
T02990
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
atr
Amborella trichopoda
Pathway
atr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18430769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18430769
03009 Ribosome biogenesis [BR:
atr03009
]
18430769
04131 Membrane trafficking [BR:
atr04131
]
18430769
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18430769
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
18430769
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
18430769
Membrane trafficking [BR:
atr04131
]
SNARE
SNARE associated proteins
Others
18430769
Autophagy
Aggrephagy
Other aggrephagy associated proteins
18430769
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18430769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
CDC48_2
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
Parvo_NS1
AAA_18
Vps4_C
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
TsaE
AAA_24
ResIII
DUF815
Zeta_toxin
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
18430769
NCBI-ProteinID:
XP_006840975
UniProt:
W1P6P0
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MAASSSDQPESSSDAKGKKDFSTAILERKKAPNRLVVDEAINDDNSVVSMNPATMEKLQF
FRGDTILIKGKKRKDTVCVVLVDEQCEEPKIRMNKVVRANLRVRLGDVVSVHQCPDVKYG
KRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPARKGDLFLVRGGMRSVEFKVIETDPG
DYCVVAPDTEIFCEGEPVRREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKS
IGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE
AEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLQSRAHVIVMGATNRPNS
IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLADDVDLERVAKDTHGYVGADLA
ALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNEHFQTALGSSNPSALRETVVEVP
NVSWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA
NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGD
AGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEAS
RLQIFKACLRKSPVSKDVDLSALAHYAHGFSGADITEICQRACKYAIRENIEKDIERERK
KSENPEAMEEDDIDDVPEIKAAHFEESMKYARRSVSDADIRKYQMFAQTLHQSRGFGSEF
RFPERPENPSGTGAADPLSSTAPVGDDDDLYN
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcgagttctgatcaacctgaatcgtcttctgatgcaaaaggaaagaaggat
tttagcacagcaattctggaacgtaagaaagcccctaatcgccttgttgtcgatgaagct
atcaatgatgacaattcagttgtctccatgaaccctgcaactatggagaagcttcaattt
ttccgtggagatactattcttatcaaggggaaaaagcggaaggatacagtatgtgtcgtt
ctggttgatgagcagtgtgaagaacccaagattagaatgaacaaagtagtgagggctaat
ctaagggtgcgtcttggtgatgtcgtctctgtgcatcagtgccctgatgttaagtatggg
aagcgtgttcacatccttccaattgatgatacaattgagggtgtgaccgggaatctcttt
gatgcttatttaaaaccttacttcttggaatcctatcggccggctagaaagggagatctg
tttcttgtcagaggtggtatgcgaagtgttgaattcaaagtcattgagacagatcctggt
gattattgtgttgttgccccagatactgagatattctgtgagggggagcctgtgaggcgt
gaggatgaagaaagattgaatgaggtaggatatgatgatgttggtggagttagaaagcaa
atggctcaaatacgcgagctggttgaacttcctctgagacaccctcagctttttaagtct
atcggtgtgaagcctccaaaaggtatattgctgtatgggccaccaggttctgggaaaacc
ctaattgcacgagctgttgccaatgaaactggtgcatttttcttcttaatcaatgggccc
gagatcatgtcaaagctggctggagagagcgaaagcaatctaagaaaagcttttgaggag
gcagagaaaaatgctccatctatcatttttattgatgaaattgactctatagccccaaag
agagaaaaaacacatggtgaagtagaaaggcgcattgtatcacaacttcttactcttatg
gatggtcttcagtcccgagctcatgtaattgtgatgggggctactaataggcccaatagc
attgacccagctcttagaaggttcggaaggtttgatcgggagattgatattggtgttcca
gatgaagtcggaaggctggaagtccttcgtattcatacgaagaatatgaagcttgcagat
gatgtggatcttgaaagagtagccaaagacacacatgggtatgttggtgcagatcttgct
gctctttgcacggaggctgcactccagtgcatcagggaaaagatggacatcatcgacctg
gaggatgaaacaatcgatgccgagattctcaactccatggctgtgacaaatgaacacttt
caaactgcattgggttcttcgaatccatctgctttgcgtgaaacggttgttgaggtaccg
aatgtctcatgggaagatattggtggtttggacaatgtcaagagggagcttcaggagact
gttcaatacccagtggagcatcctgagaaatttgagaagtttggcatgtcaccatctaaa
ggagtattattttatggccctcctggctgtgggaaaaccctccttgcaaaggccattgca
aacgagtgtcaggctaacttcattagtgttaagggacctgaattgttgacgatgtggttt
ggagaaagtgaagctaacgtgcgagagatattcgataaagcccgccagtcggctccatgt
gtgcttttctttgatgaacttgattcgattgctactcagcgtggaagtagtgttggtgat
gctggtggtgctgccgatagggttttgaatcagctgttgacagaaatggatggcatgaat
gcaaagaagacagttttcatcattggggcaaccaataggcccgacattattgaccctgca
ttgctaaggcctggacgattggaccagctgatttacattcccttgccagatgaggcttca
aggctgcaaattttcaaggcttgcttgcgcaaatcccctgtttcaaaggatgttgatctc
tcagcccttgctcactatgctcatggtttcagtggagctgatatcacagaaatatgtcag
cgtgcttgcaaatatgcaatcagagagaacattgagaaggacatcgaacgggagaggaag
aagagtgagaatcccgaggcaatggaggaggatgacattgatgatgttcccgagatcaag
gctgcacattttgaagagtccatgaaatatgccaggaggagtgtcagtgatgctgacatt
cgcaagtaccaaatgtttgctcaaactctgcatcaatctcgaggatttgggtcagagttt
cgattccccgagcgacctgaaaatccctcaggaacaggggctgcagatccattatcttct
acagctcctgttggcgatgatgatgatctttataattaa
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integrated database retrieval system