Amborella trichopoda: 18430844
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Entry
18430844 CDS
T02990
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
atr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18430844
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
18430844
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18430844
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18430844
03036 Chromosome and associated proteins [BR:
atr03036
]
18430844
Protein phosphatases and associated proteins [BR:
atr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
18430844
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
18430844
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
18430844
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
DUF7635
Motif
Other DBs
NCBI-GeneID:
18430844
NCBI-ProteinID:
XP_020520815
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MGSKLEWKFSQVFGERKAGEEIENVDIITAVEFDKSGEYIASGDRGGRVVLFERTNGKYH
GSRKDLERLDHPPRSHPEYHYKTEIQSHEPEFDYLKSFEIEEKVNKVKWCPRANDSLFLL
SANDKTIKLWKVMQRKVKKVEEINPNPSVSSENTLLSGKGFLLGQEESPVANGNSLEKTS
GILPNDLSKSLEESLSLRHLILREPSISRCRRVYAHAHDFHINSISINSDCETFISADDL
RINLWNLEKSYQCFNIIDLKPNNMEDLTEVITSAEFHPVHCNLLAYGGSKGIIRLVDMRQ
SALCDGCARIFEDKAAHGPRSFLTELIGAISHMKFASNGRHVLSRDYMNLKLWDLHMDSS
PISTFKIHEYLSPKLSELYNNDLIFDKFECCLSQDGLHFATGSYSNLFQVYSHGSGREER
TILEACRNPNRKPLLPKSTKSVRSFASLTRGYGKRGHEASIFDINGDPCDLTMKLLHLAW
HPTSNLIACASANSLYMYYA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgaagcttgaatggaagttttcacaggtttttggcgaaagaaaggctggagag
gagattgaaaatgtggacattataactgcggttgagttcgacaagagtggtgaatatatt
gcctctggagatcgtggtggtcgtgttgttctatttgaaaggacaaatgggaaatatcat
gggtctagaaaagatttggaaagattggatcatcctcctagaagccaccctgaataccat
tacaagaccgaaatccagagccatgagccagagtttgattatctgaagagtttcgaaatt
gaagagaaggttaataaagtaaaatggtgccccagagccaatgattctttgtttcttctc
tcagcaaatgacaagaccatcaaactatggaaggtcatgcaaagaaaagtcaagaaagtt
gaagagataaatccaaatccatctgtatcttccgaaaatacactcttatcaggaaagggt
tttctattggggcaggaggaatcacctgttgctaatgggaactctttggagaagacaagt
ggaatactgccaaatgatttgtcgaaatctttagaggagagtttgtcacttcgtcatctc
atactcagagagccttccatctcaagatgtcggagggtgtatgctcatgcccatgatttt
cacattaactccatctccatcaacagtgactgtgaaacattcatctctgctgatgatctc
agaataaacttgtggaacttggagaaaagctatcaatgtttcaacattattgacctaaag
cctaacaacatggaggacctcactgaggttattacatcagctgagttccacccagttcat
tgtaatctcttagcttatggtggctcgaaaggtataatccgactagtggacatgcggcaa
tcagccttatgtgatggatgtgcaaggatatttgaggataaagcagcacatggacccaga
tcctttttgacagagctaattggtgccatttctcatatgaagtttgcgagcaatgggagg
catgttttaagccgtgattacatgaatctgaagctctgggacttgcatatggactcatct
cctatttcaacattcaagattcatgagtatcttagtccaaagttatctgaattatataac
aacgacttgatatttgacaaattcgaatgctgccttagtcaggatggccttcatttcgca
accgggtcttacagcaatctttttcaagtttactctcatggctctggacgtgaggaaaga
acaatcttggaagcttgcagaaaccccaacaggaagccgcttctcccaaagagcacgaaa
tctgtgcgatcattcgccagccttacacgtggttatggaaaacgaggacatgaagcctca
atctttgatataaatggagatccatgcgacctaaccatgaagctactccatctggcatgg
caccccacttctaatcttatagcctgtgcctctgcaaatagcttgtacatgtattacgca
tag
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integrated database retrieval system
