Amborella trichopoda: 18431073
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Entry
18431073 CDS
T02990
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
atr
Amborella trichopoda
Pathway
atr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18431073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18431073
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18431073
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
U-box type E3
18431073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
HEAT_2
zf-Nse
Arm_2
zf-C3HC4_4
Neurochondrin
KAP
zf-C3HC4_2
MCAfunc
zf-C3HC4
Histone_HNS_N
zf-NOSIP
Rhomboid
Motif
Other DBs
NCBI-GeneID:
18431073
NCBI-ProteinID:
XP_020520986
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MAGDPHFLARSLLDIVEEISKIGEYRNLVRKECVNLTRRVTLLSPLFEEIRDFKAPVSDK
CRLCLDGLVKVLRASKGLLQIGHCASQVFLVFEGKWIASQFQDVSLQLEKTLGSFPYESF
EISDEIREQVELVHAQLKRSKERNGSMDLELLSDVTTILSHQAHVKDLDNSLLRRVMEKL
EIVIIDDVNQELQALHDSPIHVPSQSLEQMKNVLGKLKDCILSCISNIEGAGVNKRRLSN
RNNSFKDDKTPDSLIIPDDFRCPISLELMRDPVIVATGQTYERSCIQRWIDGGHKTCPKT
QQTLPHLTLTPNYVLRSLITQWCDAHGVEQPKRSGSTRLRKSSDGTLQEVGGNRALIDSL
VTKLSSGVLDDQRSAAGEIRLLAKRSTDNRICIGEAGAIPILVRLLSTSDPRTQEHVVTA
LLNLSIFDNNKSIIVLAGAIPHIVEVIRVGSMEARENAAAALFSLSLVDENKITIGAAGA
IPALVGLLCSGSPRGKKDAATALFNLCIYQGNKARAVRAGILNPLMTMLTDTGNGMVDEA
LTILAVIASHPEGKVAIAKANAIPVLVDLTRTGLPRNKENAVAILLTLCKKDGENLACVK
RLGAYIPLTELVKSGTERAKRKAASLLEHMGRLHQL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctggagatccccattttcttgcgaggtctctcttggatattgtagaagagatatct
aagattggggagtacaggaaccttgtgaggaaagaatgtgtgaatctcacaagaagagtc
accctcttgtcgccattgtttgaagagatcagagattttaaagcccctgtttcagataag
tgtcgtttatgccttgatggccttgttaaagtgcttcgggcttcaaaggggcttcttcag
atagggcattgtgctagccaggtgtttctggtttttgagggtaagtggatcgccagccag
tttcaagatgtatcgttgcaattggaaaagactcttggatccttcccttacgaatccttt
gagatatcggatgagattcgagaacaggttgagcttgtccatgcgcagctgaaacgatca
aaagaacgaaatgggtccatggatttggaacttctctcagatgtcactaccattttatca
caccaagctcatgttaaagaccttgataatagcttgcttaggagggttatggagaagtta
gaaattgtgattattgatgatgtgaaccaagagttgcaagcgttgcatgatagccccata
catgttcctagccaaagcttagagcaaatgaaaaatgtattgggaaaactcaaagattgc
atcttgtcttgtatttctaatatagaaggagccggtgtgaacaagaggcggctatctaat
aggaacaatagttttaaggatgacaagacccccgattctctcatcattcctgatgacttc
cgttgccccatatcgcttgaattaatgagggatcctgttattgttgccactgggcagact
tatgagcgctcttgtatccaaagatggatagatggtgggcacaagacctgcccaaagacc
caacaaacattaccacacctcacgctaaccccaaactatgtgcttagaagcttgatcact
caatggtgcgatgcccacggggttgagcaaccaaagagatcaggcagcaccaggcttaga
aaaagtagcgatggcacactccaagaagttggaggcaaccgagcactaatcgattcctta
gtcacaaagctctcaagtggggttctcgatgaccaaaggtctgcagcgggagaaattcgt
cttttggcaaagaggagcactgataatcgaatatgcattggagaagctggtgccattcca
atccttgtccgtcttttatcgaccagtgatcctcgaacccaagaacatgttgttactgct
cttttaaatctctctatttttgataataataaaagcatcatagtcttagctggggccatt
ccacatattgttgaagtgattagagtggggagcatggaagcgagagaaaatgcggctgct
gctctctttagcctatctctcgtagatgagaacaaaataactattggtgctgcaggtgcc
atccctgcattggttgggttgctgtgttcaggtagccctaggggtaagaaagatgctgcg
actgctttgtttaacttatgcatatatcaaggaaataaggctcgggctgttcgggctggt
atattgaacccattgatgacgatgctcactgatactggcaatggaatggtggatgaggct
ctcaccatattggctgttatcgctagccatcctgaagggaaggtggcgatagcaaaagca
aatgctataccagttttggtcgacctaacaagaacagggttgcctcgaaataaagagaat
gcagttgctattctccttactttgtgcaaaaaagatggggagaatttggcttgtgttaaa
aggcttggtgcttatattcccctgacagagctggtgaagtccggaacagaaagggccaag
aggaaggctgcgtctttgttagagcacatggggaggctgcaccagctatag
DBGET
integrated database retrieval system
