Amborella trichopoda: 18431258 Help Entry 18431258          CDS       T02990                                  Name (RefSeq) phytochrome B   KO K12121   phytochrome B Organism atr  Amborella trichopoda Pathway atr04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:atr00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     18431258 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PHY PAS PAS_2 GAF HATPase_c HisKA PAS_4 PAS_9 PAS_3 PAS_8 Sigma70_ner Motif Other DBs NCBI-GeneID:  18431258 NCBI-ProteinID:  XP_006841448 UniProt:  W1P5B9 LinkDB All DBs Position Unknown AA seq 1124 aa AA seqDB search MASGRRGAYTQSSGASNIRTHNNTETISKAIAQYNADARLHAVFEQSGESGKSFDYSQSV KSTTESVPEKQITAYLSKIQRGGHIQPFGCMIAIEESSFRVISYSENAIEMLDLMPQAVP SMDQTEILKVDTDVRTLFTPSSALSLAKAARAREITLLNPVWIHCKNSGKPFYAILHRID VGIVIDLEPARSEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEHVRELTG YDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMICDCHA KPVKVIQDDGLMQPLCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIVNGADEEGSGPRQ PTKLWGLVVCHHTSPRYIPFPLRYACEFLMQAFGLQLNMELQLAAQMTEKRILRTQTLLC DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYKGTCWLLGVTPTEAQVKDIAEWMLACHGD STGLSTDSLADAGYPGAASLGDAVCGMAAANITSRDFLFWFRSHTAKEIKWGGAKHHPED KDDGQRMHPRSSFKAFLEVVKSRSLPWENVEMDAIHSLQLILRDSFQELETGNSKSLVNT QQISGMELQGMDELSSVAKEMVRLIETATAPIFAVDSLGKINGWNAKVAELTGLSVEKAM GKSLVHDLVHKEYSEVVDKLLYRALRGEEDKNVEIKLKTFGSQDQKKAVYVVVNACSSKD YTNNVVGVCFVGQDVTGQKMVMDKFIHIQGDYKAIIHNPNALIPPIFAADENTCCSEWNT AMEKVTGWGRGEVMGRMLVGEVFGSCCQLKGPDALTKFMIVLHSAIGGQDTDKFPFSFFD RNGKYVQALLTANKRANLDGQIIGAFCFMQIASPDLQQALEMQRQQEKKCFARMKELAYI CQEMKNPLNGIRFTNKLLESTELSDHQKQFIETSAACERQMMKIVMDIDLESIEEGYLEL DISEFLLGNVMDAVVSQVMILLREKDLQLIRAIPEEIKTMSIFGDQVRLQQVLADFLLNI VRFAPSPEGWVEIEVKPYLKLISDGMGIVHLEFRMACPGEGLPSDLVQDMFHRSRWVTQE GLGLNMCRKILKLMNGEVQYIRESERCYFLIIVELPSPPLDAVS NT seq 3375 nt NT seq  +upstreamnt  +downstreamnt atggcgtctggtagaagaggggcgtacactcaatcatccggagccagcaatatcaggacc cataacaacacagagacaatcagcaaagcaattgctcaatacaatgcagatgccaggctt catgctgtgtttgagcaatcgggtgaatcaggtaagtctttcgattattctcaatcggtc aagtccaccactgaatcagttcctgaaaaacaaatcaccgcttatctctctaaaattcaa agaggtggtcatatccaaccatttgggtgcatgattgccattgaagaatcgagtttcagg gtcataagctacagtgaaaacgccattgagatgcttgatttaatgcctcaagcagttcca agcatggaccagactgaaattctcaaggtggatactgatgttagaacccttttcaccccg tcgagtgctttatcgctggcaaaggcagctagggctcgagaaatcactcttctaaaccct gtttggattcactgtaagaattctggaaaacccttttatgcaattctccataggattgat gtgggtattgttatagacttagagcctgctcgatcagaggaccctgctctctctatagca ggggctgttcagtctcagaagctagcagttagggcaatttcgaggctccaatctcttcct ggtggtgatattggcttattgtgtgatacagtggttgagcatgttagagaacttactggt tatgatagagtcatggtgtataagtttcatgaggatgagcatggtgaggttgttgcagag attaggcgatctgatcttgagccctatcttggccttcattacccagctactgatatacct caagcctcgaggtttttgttcaaacaaaatagagtgagaatgatatgtgattgccatgct aagccagttaaggtcattcaagatgatggattaatgcagcctctttgcttagtgggttct acacttagagcaccccatggctgccattctcaatatatggccaacatgggttcaatagct tctttagctatggctgttatcgtgaatggagctgatgaagagggctcaggcccacgccaa ccgacgaagctatggggtcttgttgtgtgccaccacacgtcacctcgatatattcccttt cctcttcgctatgcctgtgagttcttgatgcaagccttcggcctccagttaaatatggag ctccaattagctgcccaaatgactgagaaacggatattaagaacccaaactctactttgt gatatgcttctaagggatgctccaattgggattgtgacccaaagccctagtataatggac cttgtcaagtgtgatggggctgccctatactacaagggtacttgttggttacttggagtg accccaactgaagcccaagttaaggatatagcagagtggatgcttgcgtgccatggagat tcgacggggttgagcactgatagcttagctgatgctggctacccaggtgctgcctctctt ggtgatgcagtttgtggcatggcggctgccaatataacttcaagagactttttattttgg tttcggtctcatactgctaaagaaatcaagtggggtggagccaaacatcaccctgaagat aaggatgatggacaaagaatgcatccacgttcttcatttaaggctttcctagaggtggtg aagagtcgcagcttgccctgggagaatgtggagatggacgctatccactctctgcaactt atattgagggattcttttcaagagttggagactgggaattcaaagagtttggtgaataca caacaaatcagtggcatggagttgcagggaatggatgagttgagctcggtggcaaaggag atggtgaggttgattgagacagctactgcacccatctttgcagttgattcattggggaaa ataaatggctggaatgcgaaggttgcagagttgacggggttgagtgttgagaaggcgatg gggaaatcattggtgcatgacctggtacataaggagtattctgaggttgtggacaagctt ctctaccgtgctttgagaggggaagaagataagaatgtagagataaagctgaaaactttt ggctctcaagatcagaaaaaggcagtatatgtggtggtcaatgcctgctcaagcaaggac tacacaaacaatgttgttggggtttgcttcgtgggtcaagatgtaacaggccagaaaatg gtcatggataaatttattcacattcaaggtgattacaaggccattatacataaccccaat gctttgatcccacccatatttgccgcagatgagaatacttgttgctctgagtggaatact gcaatggagaaagttactgggtgggggagaggagaagttatgggaaggatgcttgttggg gaggtttttggcagttgttgccagctaaagggccctgatgccctaacaaaattcatgatt gttttacatagtgcaattgggggtcaggacacagacaagtttcccttttcattctttgat aggaatgggaaatatgttcaagctcttttaactgctaataaaagggccaatttggatggg cagattattggggccttttgttttatgcaaatagcaagcccagacctacaacaagcccta gaaatgcagaggcaacaagagaagaagtgttttgctagaatgaaagagttggcatacatt tgccaggagatgaagaaccctttgaatggaattcgtttcaccaacaaactcttggagagt acagaattatcggatcatcagaaacagttcattgagacgagtgctgcttgtgagaggcaa atgatgaagattgtcatggacattgacctggagagtatagaggaagggtacttggagctt gatatatctgaatttttactcggaaatgtcatggatgcggttgttagccaagtgatgatt ttgctgagagagaaggatctgcaattaatacgtgcaattcccgaggaaattaagacaatg tctatatttggtgatcaagttagacttcaacaagtgctagcggactttctgttgaatatt gttcggttcgccccatcacctgagggttgggtagaaattgaagttaagccatatttgaag ctaatctctgatgggatggggattgtgcatctagaattcagaatggcatgccctggtgag ggcctcccgtcagatctggtccaggatatgttccatagaagcaggtgggtgacccaagag ggcctaggtctgaacatgtgtaggaagattctcaaactaatgaatggagaggtccaatac atcagagagtctgagaggtgctacttcctcatcattgttgagcttccaagtcctcctctt gatgctgtttcctga

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