Amborella trichopoda: 18431294
Help
Entry
18431294 CDS
T02990
Name
(RefSeq) long chain acyl-CoA synthetase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
atr
Amborella trichopoda
Pathway
atr00061
Fatty acid biosynthesis
atr00071
Fatty acid degradation
atr01100
Metabolic pathways
atr01212
Fatty acid metabolism
atr04146
Peroxisome
Module
atr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
18431294
00071 Fatty acid degradation
18431294
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
18431294
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atr01004
]
18431294
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18431294
Enzymes [BR:
atr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
18431294
Lipid biosynthesis proteins [BR:
atr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
18431294
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of breast milk
18431294
Exosomal proteins of breast cancer cells
18431294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18431294
NCBI-ProteinID:
XP_020521079
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MKEFAVIVEDGKEGKDGKPAVGPVYRNVLSKDGFPPPIPDMNTSWDVFRASIEKYPSNKM
LGWREFHGGKAGKYIWKTYKEIYDDVLLVGAALRASGARPGSCVGIYGVNCPQWILALEA
CNGHSFICVPLYDTLGPDAVDFIVEHAEIDYVFIQDKKLTEILKHDKKYSRRLKLLVCFT
TLTKQQRQNAAGYEIAAYSWDEFLQMGKEYPTELSPPRPLDVCTIMYTSGTSGEPKGVIL
THESLVMYIAGLDIFMEQFEDKMTVDDVYLSFLPLAHILDRMVEEYFFYKGASVGFWQGD
IEALKDDLMELKPTYFTGVPRVFERVYESATKAIEEVGPLRKKIFNFLYKHKLGWMKSGY
KHSEASPFADLIAFRKVKARLGGRVRLITSGSAPLSTEVEEFLRVASCAFVLQGYGLTET
CGLSAHCFPDEMSMMGTVGVPSVYTELRLEEVPEMGYYPLGETARGEVCVRGKTLFSGYH
KNPDLTREAIRDGWFHTGDIGELQPNGILKIIDRKKNIFKLSQGEYIAVEYLEKTYCSAP
IIEDIWVYGNSFESMLVAVVVPHKESAEKWASLNGQKGSLTELCTLQQLQNHILLELRSL
AEKNKLRKFEFIKAVFLDPQPFDIERDLVTPTLKKKRGQLLKHYKSLLVINLLRKIKTSC
QKKGA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatttgctgttattgtggaggatgggaaggaggggaaggatgggaagccggct
gttggtccagtttaccgaaatgtattatcaaaggatgggtttccaccacctattcctgat
atgaacacctcttgggatgttttcagggcctcaattgagaagtatccttcaaataagatg
cttggatggcgtgaatttcatggtggaaaggcagggaaatatatttggaaaacctacaaa
gaaatctatgacgacgttttgcttgttggtgctgccttgagggcaagtggtgccagaccg
ggttcatgtgttggaatatatggagtgaactgcccacagtggatattagccttggaggct
tgcaatggccacagtttcatttgtgtcccactttatgatacacttggaccagatgctgtg
gatttcatcgttgaacatgcggagattgattatgtttttattcaggataagaaattaacg
gaaatattaaaacatgacaaaaagtattctagaaggctaaagttgctggtttgcttcaca
accctgacaaagcagcaaagacaaaatgcggccggctatgaaattgcagcatattcctgg
gatgagtttcttcaaatgggtaaagaatatccaactgaactttcacctccgaggcctctt
gatgtatgcactataatgtacacaagcggaacaagtggagaaccaaaaggtgttattttg
acacatgagagtcttgtgatgtatatagctggacttgacattttcatggagcagtttgaa
gataagatgactgtagatgatgtatatttatctttccttccacttgctcacatccttgat
cgcatggtggaggaatactttttctataaaggtgcatctgttggcttctggcaaggggat
attgaagcgttgaaggatgatcttatggagttgaagccgacgtacttcactggtgttcct
agggtgtttgaaagagtttatgaaagtgcaactaaggcaatagaagaagttggtccactc
aggaagaagatctttaattttctctataaacacaaacttggatggatgaaatcagggtat
aaacatagtgaagcatcacccttcgcagacttgattgcattcagaaaggtcaaggcaagg
ttaggaggccgtgttcgcttaataacatcaggaagtgctcctttgagtacagaagtggag
gagttcttaagagttgcgagttgtgcttttgttctccaaggctatggattgactgaaaca
tgtggattatcggcgcattgtttccctgacgagatgagcatgatggggactgtgggagtt
ccctctgtgtatactgagctacgtcttgaggaagttccagagatggggtattatcctctt
ggcgaaactgcacgtggagaggtttgtgttagagggaagacactcttttcgggataccac
aaaaatcctgatcttacaagagaagccatcagagatggttggttccatacaggagatata
ggggagttgcagccaaatggtattttgaagattattgataggaagaaaaatatattcaaa
ctttctcaaggggagtatattgcagttgaatatctggagaaaacctactgctctgcacct
attattgaagatatttgggtatatggaaatagcttcgagtcaatgttggttgcagtagtt
gtaccacataaagaaagtgctgaaaaatgggcatctctcaatggacaaaaggggtcctta
actgagctgtgcacacttcagcaactgcaaaatcatattctccttgagcttagatcactt
gctgagaagaacaagctgagaaaatttgagtttatcaaagcggtcttcttggatcctcag
ccatttgatattgaaagggacctggtgacacctacactgaagaagaaaaggggccaactt
ctgaaacactacaagtctctgctggtgataaatcttttgagaaaaataaaaacaagttgc
caaaagaagggtgcttga
DBGET
integrated database retrieval system
