Amborella trichopoda: 18431327
Help
Entry
18431327 CDS
T02990
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18431327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18431327
Spliceosome [BR:
atr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
18431327
Complex C
U4/U6.U5 tri-SnRNP related factors
18431327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
18431327
NCBI-ProteinID:
XP_020521157
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MVHKVPSPYDSTRSLTCRWTLESAGQLEPRRSALEDDFEEEEEKEEEDQATAALENGAHE
KDSYRGRSPGRERDRDRRRDSHRQYRDRDYDRDRDYDRDRDYDRDRGRGRDKDRERDRHH
RDRLRDEEYGRDGRDHHHRRDRERERERERRRSRSRSRDHKERDRDGAGDHRKRHRSPSP
PQEKERKKKEKEKKKDDGTDHPDPEIAEANRLRASLGLKPLKM
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggttcataaagttccttctccatatgattctactcggtccctcacctgcagatggact
cttgaatcagcagggcagttagaacctagaagaagtgcattagaagatgactttgaagag
gaagaagaaaaagaagaagaggaccaagctacggctgcacttgaaaatggggcgcatgaa
aaggattcctatcgtggaaggagtcctggaagggaaagagatagggacaggaggcgtgat
agtcataggcaatacagggaccgggattatgaccgtgatcgggattatgatcgtgatcgg
gactacgatcgtgaccgtggtagaggaagagataaagatagagagagagaccggcatcat
cgtgatcgcttgagggatgaggagtatggtcgtgatggtagggatcaccaccacaggcgg
gaccgtgaaagggagagagagagggagagacggcgaagccgaagtaggagtagagatcac
aaagagagggaccgggatggagctggggaccatcggaagaggcaccgaagccctagtccc
ccacaagagaaagagcgcaaaaagaaggaaaaggagaagaagaaggatgatggtacagac
catccagacccagagattgctgaagctaaccgccttcgagcttcactgggtctgaaacct
ctaaaaatgtga
DBGET
integrated database retrieval system
