KEGG   Amborella trichopoda: 18431337
Entry
18431337          CDS       T02990                                 
Name
(RefSeq) flap endonuclease 1 isoform X2
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
atr  Amborella trichopoda
Pathway
atr03030  DNA replication
atr03410  Base excision repair
atr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    18431337
   03410 Base excision repair
    18431337
   03450 Non-homologous end-joining
    18431337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atr03032]
    18431337
   03400 DNA repair and recombination proteins [BR:atr03400]
    18431337
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atr04147]
    18431337
DNA replication proteins [BR:atr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    18431337
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     18431337
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     18431337
Exosome [BR:atr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18431337
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 DUF4004
Other DBs
NCBI-GeneID: 18431337
NCBI-ProteinID: XP_011622239
LinkDB
Position
Unknown
AA seq 470 aa
MGIKGLTKLLADNAPNGMKEHTFESYFGRKIAIDASMSIYQFLIVVGRTGSEMLTNEAGE
ITSHLQGMFSRTIRLLEAGIKPLYVFDGKPPDLKKEELAKRLSKRVGATEDLAQAIETGD
KADIEKYSKRTVKVTRQHNEDCKRLLRLMGVPVIEAPSEAEAECASLCKNGNVYAVASED
MDSLTFGAPRFLRHLMDPSSKKVPVMEFEIGKILEELDLTMDQFIDLGILCGCDYCESIK
GIGGQTALKLIRQHGSIENILENINKERYVIPENWPYQDARCLFKEPLVSPLEDLPEVKW
ASPDEEGLSTFLVKENGFNQDRVTKAIEKIKAAKNKSSQARLESFFKPVVTTATPIKRKE
KRCILGSAPKLKLFNLQVQNRIKPKVNGGFCLLKAHINPKHSRIFSWGSACQACKRNYKQ
EIQSCWWEKEIEEMDMKVENSALLLWVARTSLGNLQKIIKKQGCMAIFWC
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgggaatcaagggtttgacaaagttattagcggataatgctcccaatggaatgaaggag
catacgttcgagagctattttggtcgcaaaattgcaatagatgcaagcatgagcatatac
cagttcttgattgttgtaggaagaactgggagtgaaatgcttacaaatgaagctggtgaa
atcacaagccacttacaaggcatgttctctaggacgataagactattagaagctggaatt
aagccactatatgtgtttgatgggaagcctccggatctaaagaaggaggagcttgcgaaa
aggctctctaagagggtgggtgcaacagaggatttagcgcaggccatagagacaggggac
aaagcagatattgagaaatacagtaagagaacagtaaaggtcacaaggcaacacaatgaa
gactgcaaacggcttttaagactaatgggagtgcctgtcattgaggctccatccgaagca
gaggcagaatgtgcatcactttgcaaaaatggcaacgtttatgctgtggcttctgaggac
atggattcgcttacttttggagctccaagatttcttcggcatttgatggatccgagctca
aagaaggtccctgtgatggaatttgaaattgggaagattttagaagagctagacctcacc
atggatcaattcattgacttgggcattctttgtggatgtgactattgtgagagtatcaaa
ggtattgggggacagactgctttgaagctcattcgtcagcatggatcaatagaaaatatc
ttggagaacatcaacaaagagagatatgtgatacctgagaattggccttatcaagatgct
cggtgtcttttcaaagaaccgttggtttctcctttagaagatctgccagaggtcaagtgg
gcttctccagatgaagagggcctcagcaccttccttgtgaaggaaaatggatttaaccag
gatcgagtgacaaaggcaatagagaagatcaaagcagccaagaataaatcatcccaggcc
cgtttggaatccttttttaagcctgttgtaaccacagcaacaccaattaagagaaaggaa
aagagatgcatacttggttcagcaccaaagctgaaattgtttaatttacaagtgcagaac
cgcataaagcctaaggtcaatggaggcttttgcctgctgaaggcacatatcaatccgaaa
cactccagaattttctcttggggaagtgcctgccaagcctgtaaaagaaactacaaacaa
gaaatccaaagctgctggtgggaaaaagaaatagaggaaatggatatgaaagttgagaat
tctgctctcttgttgtgggtggcaagaacttccttgggaaatttgcagaaaattatcaaa
aaacagggttgcatggctatattttggtgttag

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