Amborella trichopoda: 18431390
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Entry
18431390 CDS
T02990
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18431390
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18431390
Enzymes [BR:
atr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
18431390
Protein phosphatases and associated proteins [BR:
atr01009
]
HAD phosphatases
Fcp/Scp phosphatases
18431390
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
18431390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
18431390
NCBI-ProteinID:
XP_006841578
UniProt:
W1P5S2
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MAMNSIPSLKDAIYKIQTYLLDGISKENQLLAAANLISRSDYDDVVTERTITNLCGYPLC
NKYLPCDRPKKGRYRISLKEHSVYDLKETWLYCSPECVINSQAFSKLLKPERCEFSDPGK
IAEILNLFSSPSIEESNAGGAEKNEKISLAFSSLTIHEKEDVSVGDIQSMDFVGPYNAIE
GYVPRQDQVPPVQRKGSKSGKSTTKKDPIYPETNFASTIIIGEPSSGNLQKNSSSKFVND
HVHVNVEGSKREQHAQEKSQSHPKETKLRSALKNLGAKASTRTVSWADEQQTIVEGIQNM
TLNNCQGIESGSKCKESSDSLSVEDTMISSRRASAEACASALTEAAAAVASGQSNTLDAA
SEAGILIFPCPNSVEEENIQKVADELKPEEGEKWVKRPSLLHTGAFDTEEDSWYDAPPEG
FSLTLSSFATMWMALFGWVTASSMAYIYGRAESAEEEFVVVDGREYPHKFVLGDGLSSEI
KETLSGCLARALPGVVANIKLPTPISTLEVALGRLLDTMTFTEALPPFRMKQWHVIVLLF
LDALSVHIVPALEQHIASRRTLVHKMLEDAQVSNEEYNIMRDLFLPGQSAQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaattctattccctctctaaaagacgccatttataaaatccagacctatctc
ctagacggaatttccaaagagaaccagcttcttgcagctgcgaacctaatttctcgaagc
gattacgatgacgttgtcacagaaagaaccatcactaatctatgtggttaccctctctgc
aacaaataccttccatgtgatcgtccaaagaaggggcgatacaggatatctctaaaggag
cactcggtctacgatctcaaggagacatggctttattgctcacctgaatgtgtaattaac
agccaggccttctcaaaattgttgaagcctgagaggtgtgagttctcagaccctggtaaa
attgcggagatattgaatttgttcagttcaccgagtattgaagagagtaatgctggtggt
gcagagaagaatgaaaaaataagcttagcgttttctagtttgacgatacatgagaaagaa
gatgtgagtgttggtgatattcagtctatggattttgtgggaccgtataatgcaattgag
gggtatgtgcctcgacaagatcaggttcctccggttcaaaggaaagggtctaaaagtggc
aagtcaaccacgaaaaaggaccccatttatcctgagacaaatttcgccagtacaataata
attggagaaccatcttccggcaacctccaaaagaattcaagttccaaattcgtaaatgac
cacgttcacgtaaatgttgaaggttcaaaaagagaacagcatgctcaggaaaagtcccaa
tcccacccaaaagaaacaaaattacgatctgctttgaagaatttaggtgcaaaggcttct
actcgtacggtttcatgggctgatgagcagcaaacaatagttgagggcatccaaaatatg
acattaaacaattgccaagggatagaatctggttcgaaatgcaaagagagctcagattca
ttgagtgtcgaggacactatgatttcctctcgacgtgcttcagcagaagcatgtgcaagt
gcattaactgaggcagcagcagctgttgcttctggccaatctaatacccttgatgctgcc
tctgaagctggaattctcatcttcccatgtccaaacagtgtagaagaagaaaacattcaa
aaagtggctgatgaactaaaacctgaggaaggagaaaaatgggttaagaggccttcttta
ttgcacactggagcctttgacactgaggaagattcttggtatgatgcacctccagagggc
tttagtttgactttatcgtcattcgcgacaatgtggatggcgctttttggatgggtaact
gcatcttctatggcttatatttatgggagagctgaaagtgctgaggaagagtttgtagtt
gtcgatgggagggagtatccacataaatttgtcctgggagacggcctttcttctgagatt
aaggaaactctttctggttgtcttgctcgtgcattaccaggagttgtagcgaatatcaag
ttaccgactcctatttcaactctcgaagtagctctgggcaggctacttgacacaatgacg
tttacagaagcattaccaccctttagaatgaagcagtggcatgttattgttcttctattc
ctagatgctctctcagttcacatagttccggctcttgaacaacatattgcaagcagaaga
acactggttcacaagatgctagaggatgctcaagttagcaatgaggagtataacatcatg
agggacctatttctacctggacagtctgcacaatag
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