Amborella trichopoda: 18431422
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Entry
18431422 CDS
T02990
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
atr
Amborella trichopoda
Pathway
atr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18431422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18431422
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
18431422
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
HECT type E3
18431422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
18431422
NCBI-ProteinID:
XP_011622286
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MFFTGDSTNRKRVDLGGRSSKERDRQKLLEQTRLERKRRLGLKQETLAAIKIQKCFRGRK
AVEAERLEVREQFCIKFGERCEKVDRHCFGPESEFLRQLLFFFSLHDRDDFIRLAETCRV
LHQFIKFDGNVKILFAGDDLPSNQAIVENRVKRLTFLCLQAIHHNRAWLKDQLLMPPESN
DKPAVIFLEAIFSLTEPGLPWVCKLVEYVSKRNAFGLLRDIILTIQCAEKGYDSASISSL
ERALIHISSHVAQPRCVCPKIDPRWSFPVQILTIPLLWKLFPCFMKVFATQGLSKIYVHE
MALFLPGHVNYLPPDGAPGFPGYACLLGNLLEAAGIVLSQPNCEFQVAVDFSVVAAFLLD
ALPPSLLSNGTPKDSTENDDIMDEDGEHSKALLSKNLEKQIFDSIDSSFLKNMVSVLFRD
TPNRKADGQNDAEIRAIGAVCAFLHMIFTILPLERIMTGLAYTTELVPLLWKFIKCCHEN
QKWPSLSELLTCSPGDAPGWLLPLSVFCPVYRHMLMIIDNEEFYEQERPLSLQDIRVLIT
FLKEALWQLLWVSPGKLPSLLKAAKNISNLRRLSVQFIQHKVSGGTSELLAQLQDWNNRR
QFTSPNDFHAREAADELFVSQAINKNTRARDLLKQAPFLVPFTSRVQIYTKQLATARQSS
SPHPFPRHNFTIRRDHIVEDGFSKLSLLSAEDLKGMIRVTFVNELGVEEAGIDGGGIFKD
FMENITRAAFDVQYGLFKETVDHLLFPNPASGMIHGSHLEYFRFLGNVLGKAMFEGILVD
IPFATFFLSKLKQKHNYLHDLPSLDPELYKHLLFLKHYKGDISELGLYFVIVNNEYGEQT
EEELLPGGRDIQVTNENVIMFIHLIANHRLNIQIRQQSLNFLQGFQQLIQPEWIAMFNEH
ELQLLISGSLEGMNVDDLRSNTHYTGGYHEKHPVIEMFWEVVKNFSSDHQNKFLKFVTGC
SRGPLLGFKYLEPQFCVQRAAPDHASEYDLDRLPTSATCMNLLKLPPYKSKEKLETKLIY
AINADAGFDLS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcacaggtgattcaaccaatcgtaaaagagttgacttagggggtcgaagctct
aaggagagagataggcagaagcttctagaacagaccaggctagaaaggaagcggaggcta
gggcttaagcaagaaactcttgctgcaattaaaattcagaaatgttttagggggaggaag
gctgttgaagcagaacgcttggaggtgcgagaacaattctgcattaagtttggggagaga
tgcgagaaggtagacaggcattgctttggccctgaatcagagtttttgcggcagttactc
ttcttcttcagcttgcatgaccgagatgattttatccggcttgctgaaacctgtcgagta
cttcaccaattcattaaattcgatggaaatgtcaagattctctttgctggcgacgattta
ccatcgaatcaagctattgtggagaatagagtcaagcggctcacatttctttgcctacaa
gctatccatcacaatagggcttggttgaaggaccaacttttgatgcctcctgaatcaaat
gacaaacctgcagtcatctttctagaggccattttttctttaactgaacctgggctccca
tgggtttgtaaacttgtggagtatgtttcaaaaagaaatgcctttggcttgttacgagac
ataattctcacaattcaatgtgcagaaaaaggatatgattctgcaagtatttcttccttg
gagcgtgctcttatacatatttcttctcatgttgctcaaccacggtgcgtttgtccaaaa
attgatccaaggtggagtttccctgtacaaatccttaccattccactcctgtggaagctt
tttccgtgttttatgaaggtgtttgcaactcagggcctgagcaaaatatatgtgcatgaa
atggcattgtttttacctggtcatgttaattatcttcctccagatggtgcacctgggttt
ccaggctatgcttgccttcttggtaatttgctagaagctgctggaatagttttgtctcaa
ccgaactgtgaatttcaagtggctgtggacttctcagttgttgcagcatttctgctggat
gcattgccaccatcgttattatccaatggaactcccaaagattcaaccgagaatgatgat
attatggatgaggatggggaacattcaaaagcactcttaagcaaaaatttggaaaagcag
atttttgattcaatcgattctagctttcttaaaaacatggtatctgttttattcagagat
acaccaaaccgtaaagcagatgggcaaaatgatgctgagatacgtgctattggtgccgtc
tgtgcattcctgcatatgattttcactattttacctctcgagcgtattatgactgggcta
gcttacactaccgagcttgttcctctactttggaaatttataaaatgttgtcacgagaac
caaaaatggccatctttatcagaattactgacatgctcacctggtgatgcccctggctgg
ttgcttcctctctctgtgttctgtcctgtatacaggcacatgctcatgatcattgataat
gaagagttttatgagcaggaaaggccactctctttacaagatatcagagtcctgattact
ttcttaaaagaggctttatggcagcttctatgggtcagtcctggaaagctgccatcctta
ctgaaagcagcaaagaatatctccaatctgagaagactctctgttcagttcattcaacac
aaagttagcggtggaacttctgagctcttggcacagctgcaagattggaataacaggcga
caatttacatcaccaaacgactttcatgctcgtgaagcagctgatgagttatttgtttcc
caggcaataaataaaaatactagagctcgtgacctactgaaacaagcaccctttttggtg
ccatttacaagcagggttcaaatttacactaaacaattagccactgcacgtcagagtagc
agtccacatccttttccccgtcacaatttcacaatacggcgtgatcacattgtcgaagat
ggtttcagtaaattaagcctattgtcagcagaggatctcaagggaatgattcgagttacg
tttgttaatgaacttggagttgaagaggctggtattgatggtggtgggattttcaaggac
ttcatggagaacatcactagagcagcttttgatgtacagtatggtttgtttaaggaaacg
gtggatcacttattattcccaaatcctgcttctggaatgatccatggaagccatctagaa
tactttcgatttcttggaaatgtccttgggaaggccatgtttgagggtattctcgtggat
ataccgtttgctacattcttcttgagcaaattaaagcaaaagcacaattacctgcatgac
ctaccttccctggatccagaactgtataagcaccttctttttttaaagcattataaaggt
gatatatccgaacttggtttgtactttgtgatcgtaaacaatgagtatggagagcagact
gaggaagagctccttcctgggggaagagatatacaagttactaatgagaatgttataatg
ttcattcaccttattgccaatcatcggttgaatatccagatacgtcaacaaagtttaaat
ttcttgcaaggatttcagcaacttatacagcctgaatggatagcaatgttcaatgaacat
gaacttcagcttctcatatcaggttcacttgagggaatgaatgttgatgatctacgttcc
aatacacactatactggaggttatcatgagaaacatcctgtcattgagatgttttgggag
gttgtcaagaacttttcttcagaccatcagaataagtttttgaagtttgtcactggatgc
tctcgaggaccactgcttggattcaagtacttggaacctcagttctgcgttcaaagggct
gctccggaccatgcttctgaatatgatcttgatcgtttgccaacatctgcaacctgtatg
aatcttttgaagctccctccatacaagagcaaagagaaactggaaacgaagttaatttat
gcaatcaatgcggatgccggatttgatttaagctga
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integrated database retrieval system
