Amborella trichopoda: 18431423
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Entry
18431423 CDS
T02990
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
atr
Amborella trichopoda
Pathway
atr00900
Terpenoid backbone biosynthesis
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Module
atr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
18431423
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
atr01006
]
18431423
Enzymes [BR:
atr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
18431423
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
18431423
2.5.1.29 geranylgeranyl diphosphate synthase
18431423
Prenyltransferases [BR:
atr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
18431423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
18431423
NCBI-ProteinID:
XP_020521057
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MIHAFEKKYGMSHTCLTSLPLYGYNPFAPANHPQIFSPSLIPPLPSPLVLLSLSSSSPSL
SLAFPQLVFYSLPLTPFIFDSIKTISLMAFISLPNCTNLAPKIPQVHRRSQSKPRAFASL
PPTTNTPTTIDLPAYLTAVSSNLDAQVSHTLPLQPPHIVHAPMRYCALSNPTPLAPAVCI
AVASDLFGVPHPTALIPAHALHLVHAAALMHEDMPALLDRTTRANRPTTHIKFAQNVAIL
TYDGLVPFAFAHIAESNLPADISLRLVAEISKAMGSQGFASGQYMEAQTLSWADGFFDKD
CADQVHSMKMGVLVECGAACGGIVGGAKDEEIERLRKYGRALGIMYQILWDIKEKERGGF
GKASYARGYGAERAMEVAEEMGREARKALEGFDPQGTQLLEGFADCGAAAHVGVGL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgatccatgctttcgaaaaaaagtacggcatgtcacatacatgccttacttcactgcct
ctatatgggtacaaccctttcgcccctgccaatcatcctcaaattttctctccctcactg
atccctccccttccttctcctctggttttgctctctctctctagttcttccccttctctt
tctcttgctttccctcaactggttttttacagtcttcctctcactccattcattttcgac
tctatcaaaaccatctctctcatggcattcatctcactcccaaactgcaccaacctagct
cctaaaatcccccaagtccaccgccgctcccagtcaaaaccccgggccttcgcctccctc
ccccctaccacaaacacccccaccaccatagaccttcctgcgtacctcaccgcggtctcc
tcgaaccttgacgctcaagtctcccacacactccccctccagcccccgcatattgtccac
gctcccatgcgctactgcgccctctccaaccccacccccctggcccctgcagtctgcatc
gctgtggccagcgacctcttcggtgtccctcaccccaccgccctcatccccgcccacgcc
ctccaccttgtccatgccgccgccctgatgcacgaggacatgcccgccctcctcgatcgc
accactcgcgcgaaccgccccaccacgcacattaagttcgcccaaaacgtcgccatcctc
acttacgacggccttgtccccttcgcatttgctcacatcgccgaatccaacctccccgcc
gacatctcgctgcgcctcgtagcagagatttcaaaggcgatgggatcacaagggttcgcc
tccggccaatacatggaggctcaaaccctgagctgggccgatggtttcttcgacaaagac
tgtgcggatcaagtgcatagcatgaaaatgggagttttggttgagtgtggggcggcctgt
gggggtattgtaggaggcgcaaaagatgaagagattgagaggctgagaaagtacggcagg
gcattgggaattatgtatcagatcctttgggatattaaagagaaagagagaggggggttt
ggaaaggctagctatgcgaggggttatggggcggagagagccatggaggtggcggaggag
atggggcgtgaggctcgaaaagctttggagggtttcgatccacaggggacacagcttttg
gagggctttgccgattgtggtgctgccgctcatgttggggtgggcctctaa
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