Amborella trichopoda: 18431574
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Entry
18431574 CDS
T02990
Name
(RefSeq) transcription elongation factor SPT4 homolog 1
KO
K15171
transcription elongation factor SPT4
Organism
atr
Amborella trichopoda
Pathway
atr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
18431574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18431574
03019 Messenger RNA biogenesis [BR:
atr03019
]
18431574
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
18431574
RNA polymerase I system
18431574
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
18431574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
18431574
NCBI-ProteinID:
XP_006841759
UniProt:
W1P6X7
LinkDB
All DBs
Position
Unknown
AA seq
115 aa
AA seq
DB search
MANAAQVPTGFGHELRACLRCRLVKTYDQFREMGCENCTFFNMDKDHERVVDCTTPNFNG
IISCMDPTKSWAARWLRISKFVPGCYTLAVSEQLSDEMQNVCEDNNVPYVPPKRI
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcagcccaggttccaactggttttgggcatgaactgagggcctgtcttcga
tgcagacttgtgaaaacatatgatcagtttagagaaatgggttgtgagaattgcactttc
tttaacatggataaggatcatgaacgagttgtagattgcactactcccaattttaatggg
attatttcttgcatggacccaacaaaaagctgggcagctcgatggttgagaatttcaaaa
tttgttcctggttgctatacacttgctgtttcagagcaactctcagatgaaatgcagaat
gtctgtgaagacaacaacgtgccatatgttccaccaaagcgcatctga
DBGET
integrated database retrieval system
