Amborella trichopoda: 18431650
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Entry
18431650 CDS
T02990
Name
(RefSeq) protein AUXIN SIGNALING F-BOX 3
KO
K14485
transport inhibitor response 1
Organism
atr
Amborella trichopoda
Pathway
atr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18431650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18431650
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
18431650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
LRR_NXF1-5
F-box
LRR_14
LRR_8
Motif
Other DBs
NCBI-GeneID:
18431650
NCBI-ProteinID:
XP_006841829
UniProt:
W1P742
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MGLRSEKRRHEETHVSAFPDEVLENVLAFVKSHKDRSSASLVCKHWYEVERWSRNSVFIG
NCYSLSPEILVKRFPNIRSITLKGKPRFYDFNLVPPDWGADVHSWLVVLAKAYPFLEELR
LKRMTVEDESLEFLGQSFPNFKALSLVSCDGFSTDGLAAIASSCRNLEELDLQENGIKDY
GGHWLSCFPESFTSMVALNFANLNSEVNFDALERLVTRCKSLKVLKLNRSVSLEQLQRLL
VRAPQLTELGTGSFSQDLSLKQYSELEQAFSNCKSIHTLSGLWEVTSLYLPTIYPVCSNL
KFLNLSYAGLRSPELARLLESCPNLQCLWVLDTVGDKGLEAVASSCPNLKELRVFPADPH
DFDAGGVTEAGLVAVSRGCPTINYILYFCRRMTNEAVSTVAINCPGFTHFRLCILNPYQP
DHLTHEPMDEAFGSVARYCPMLQRLSISGLLTDRAFELIGMHAKKLEALSVAFAGSTESG
LEYVLRGCLKLRKLEVRDCSFGNASLMSGIERYESMRSLWMSACNVTMSACRCLARERPR
LNVEVIREEEGDGTKAEKVYVYRSVAGPRKDCPPFVRTL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaggagtgagaaacggagacacgaagaaacccatgtctctgcttttccagat
gaggtgctggaaaacgttctggcctttgtgaaatcgcacaaggataggagctctgcgtcc
cttgtgtgcaagcattggtatgaggtagagagatggagtagaaacagtgtttttattggg
aattgctactctctttctcctgaaatcttagtcaagaggttccccaacattcgaagcata
acactgaaggggaagccccgtttctatgatttcaatcttgttcctcctgattggggtgcg
gatgttcactcatggcttgttgtattggcaaaagcttacccttttcttgaggagctcagg
cttaagagaatgactgttgaggatgaaagcctagagtttttgggtcaaagtttccccaat
ttcaaggctctctctctagtgagttgtgatggattcagcactgatgggcttgctgcaatt
gcatctagttgcaggaatttggaggagctggatttacaagagaatggcatcaaagattat
ggtgggcattggttaagctgcttccctgagagttttacatccatggtggctctcaatttt
gcaaatctcaacagcgaggtcaatttcgatgccctagagaggcttgtaacaagatgcaaa
tcactcaaggtccttaagctcaataggagtgtatctctagagcagttgcagaggcttcta
gttagagctccacagctcacagagctcggaactggctccttctctcaagacctgagcctc
aagcaatattctgagctcgagcaagcctttagcaattgcaagagcatacacactttatca
ggactatgggaagtcacttctctctatctacctaccatatatccagtttgttcaaacctc
aagttcttgaatcttagctatgctggcctgaggagccctgaacttgcaaggcttttagag
agctgtcctaatctgcaatgcctttgggtgctggacactgtaggggacaaaggccttgag
gctgtggcatcgagctgcccaaacctcaaagagctccgtgtcttccctgctgacccccac
gactttgatgctggcggtgtcactgaggctggtctcgtcgccgtgtcccgcggctgcccc
accataaattacatcttgtacttttgccggcgcatgaccaatgaggctgtctccactgtt
gccataaattgtccgggcttcacccacttccgactttgtatcctaaacccctatcaacct
gaccatctaacccatgagcccatggatgaggcctttggttcggtggctcgatattgtcct
atgctccaaaggctctctatttcaggtctcttgactgatagggcctttgagctcattggt
atgcatgccaagaaactcgaggccctctctgttgcctttgccgggtcgacagagagcggg
ttggagtatgttttgcggggatgccttaagcttaggaagctcgaggtgagggattgctcg
tttggtaatgcctctttaatgtcggggattgaaaggtatgagtcaatgaggtctttgtgg
atgtcggcatgtaatgttacaatgagtgcatgtcgatgtttggcaagagagagaccaagg
ctcaatgtggaggttattagagaggaagagggtgacggtacaaaggcagagaaggtgtat
gtttatcggtctgttgctgggccaaggaaggattgcccaccctttgtgcgcacgctttga
DBGET
integrated database retrieval system
